CAZyme3D

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Entry ID

Information for CAZyme ID: ADY41606.1

Basic Information

GenBank IDADY41606.1
FamilyGH116
Sequence Length261
UniProt IDF1KUQ2(100,100)Download
Average pLDDT?95.76
CAZy50 ID62156
CAZy50 RepNo, ADY41918.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID6253
KingdomEukaryota
PhylumNematoda
ClassChromadorea
OrderRhabditida
FamilyAscarididae
GenusAscaris
SpeciesAscaris suum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKGCLLRRFY  DLSSGIIADA  KAWDVDGDDL  IENAGQPDQT  YDVWSMHGSS  AYCGGLWLCA60
LECVRRMALT  LGEVVDAQKF  ANKLNNARKA  YERKLWNGKY  FDFDEHSTDH  KSIMADQLCG120
FWFMCITDGK  VDDVIITRQQ  ICASLKTIFE  YNVEKFANGQ  LGPVNAMMPS  GVVDSTGIQS180
EEVWGGVAYA  LASFHLLVEE  NESAFKTAEG  WYRSCWERYG  LQYQSPEAIN  ESSYYRAIGY240
MRPLAIWAMQ  SALDALRNKR  Q261

Predicted 3D structure by AlphaFold2 with pLDDT = 95.76 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH116(5-250)

MKGCLLRRFY  DLSSGIIADA  KAWDVDGDDL  IENAGQPDQT  YDVWSMHGSS  AYCGGLWLCA60
LECVRRMALT  LGEVVDAQKF  ANKLNNARKA  YERKLWNGKY  FDFDEHSTDH  KSIMADQLCG120
FWFMCITDGK  VDDVIITRQQ  ICASLKTIFE  YNVEKFANGQ  LGPVNAMMPS  GVVDSTGIQS180
EEVWGGVAYA  LASFHLLVEE  NESAFKTAEG  WYRSCWERYG  LQYQSPEAIN  ESSYYRAIGY240
MRPLAIWAMQ  SALDALRNKR  Q261

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help