CAZyme3D

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Entry ID

Information for CAZyme ID: ADX83929.1

Basic Information

GenBank IDADX83929.1
FamilyGH116
Sequence Length661
UniProt IDF0NMI6(100,100)Download
Average pLDDT?93.71
CAZy50 ID43576
CAZy50 RepNo, ACR43217.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID930943
KingdomArchaea
PhylumThermoproteota
ClassThermoprotei
OrderSulfolobales
FamilySulfolobaceae
GenusSulfolobus
SpeciesSulfolobus islandicus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MHTYINRSVN  KKLVMKIEKY  FGVPLGGIGT  GKINFYPDLT  IDDITILNNW  SNPLRRIRGF60
HILTFLDGEP  IFLQTNPGKN  VETPPRYTYI  KDMEMSVEFP  VIKYSTPLAE  IEVYSILRKN120
DIKNSSLPAL  KFKIKGKGRF  AISYPNIVGS  KRAGRTNEGY  KGKLNGVIMR  NEKALNSDPA180
YGEIFLGCVG  CKVITNFAYY  KPAKVGMTED  ITYFYNLEEY  DEKYIIRPYA  REEIGGIIYK240
DVNEEETFIL  SWFFNGRPHH  YPYGHYYENF  FKDSIDVAEY  TLKLEPDLGT  EEKVEWLKEA300
LVNSLYILTS  NTWLTKDGRF  AVYEDPYISK  LMNTIGSMTF  DGLGFTLLEL  YRDLVISADN360
HLVNCINNGE  APHDIGEESI  EDPIYGASYP  YWWTDLGPTL  VLMLYRDYVF  TSDRGILEKN420
YNKIKEIIDW  LIRKDMDNDC  IPDSKGGYDN  SYDGTHMYGA  SSYVASMFLS  ALAAFIKISE480
ILDVKIDTKY  YRFLECGKKT  FNSLWNGKYF  VLWKKNDEEN  RSCLNSQLLG  QFWCDILGLP540
PITDNDKINT  ALRSIYELNF  RASKYCLTNA  VKEDRDIDTS  TGQLRSCWPR  VSFAVAAHMI600
LRGMVKEGME  VAKREWETIK  ELNPFDQSSR  IDAIEGKYVG  LMSYIGSTSV  WLVKLALDKL660
R661

Predicted 3D structure by AlphaFold2 with pLDDT = 93.71 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH116(318-653)

MHTYINRSVN  KKLVMKIEKY  FGVPLGGIGT  GKINFYPDLT  IDDITILNNW  SNPLRRIRGF60
HILTFLDGEP  IFLQTNPGKN  VETPPRYTYI  KDMEMSVEFP  VIKYSTPLAE  IEVYSILRKN120
DIKNSSLPAL  KFKIKGKGRF  AISYPNIVGS  KRAGRTNEGY  KGKLNGVIMR  NEKALNSDPA180
YGEIFLGCVG  CKVITNFAYY  KPAKVGMTED  ITYFYNLEEY  DEKYIIRPYA  REEIGGIIYK240
DVNEEETFIL  SWFFNGRPHH  YPYGHYYENF  FKDSIDVAEY  TLKLEPDLGT  EEKVEWLKEA300
LVNSLYILTS  NTWLTKDGRF  AVYEDPYISK  LMNTIGSMTF  DGLGFTLLEL  YRDLVISADN360
HLVNCINNGE  APHDIGEESI  EDPIYGASYP  YWWTDLGPTL  VLMLYRDYVF  TSDRGILEKN420
YNKIKEIIDW  LIRKDMDNDC  IPDSKGGYDN  SYDGTHMYGA  SSYVASMFLS  ALAAFIKISE480
ILDVKIDTKY  YRFLECGKKT  FNSLWNGKYF  VLWKKNDEEN  RSCLNSQLLG  QFWCDILGLP540
PITDNDKINT  ALRSIYELNF  RASKYCLTNA  VKEDRDIDTS  TGQLRSCWPR  VSFAVAAHMI600
LRGMVKEGME  VAKREWETIK  ELNPFDQSSR  IDAIEGKYVG  LMSYIGSTSV  WLVKLALDKL660
R661

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help