CAZyme3D

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Entry ID

Information for CAZyme ID: ADW17707.1

Basic Information

GenBank IDADW17707.1
FamilyGT51
Sequence Length783
UniProt IDA0A7U4DP58(100,100)Download
Average pLDDT?89.12
CAZy50 ID28791
CAZy50 RepNo, QTN27245.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID577650
KingdomBacteria
PhylumThermodesulfobacteriota
ClassDesulfobulbia
OrderDesulfobulbales
FamilyDesulfobulbaceae
GenusDesulfobulbus
SpeciesDesulfobulbus propionicus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSRSLGAGGG  PDKRGRRLLA  ATAVFIGFAV  FAGIGLRQLL  PAEPLGPAIP  CSRLLRAADG60
TVLRLTLAGD  GQYRLWTSLD  EIAPAAVEAI  LLKEDRFFHL  HPGVNLQALL  RAAWTTYVRG120
ERQGGSTLSM  QLARRLHRLN  TRTLSGKLKQ  ILLALWLEAR  HSKRELLEAY  CNLAPMGGNI180
EGLGAAARIY  FAKTASQLTV  AESLALAVMP  QNPTKRSDFG  AEQQQARRRL  AQAWRVRHPE240
QSPETILADQ  EIKGLRRGHL  PYLAPHLTDH  LLVRETGRRQ  VIDTTLDSSL  QGLLERLMRQ300
YLTERRHLGM  ANAAALLVDR  RDMGVRALVG  SADYFDPVLH  GQVNGVLAKR  SPGSTLKPFL360
YGLALDQGLI  HPLSMLSDAP  TAFGPFQPEN  FDGRFVGPIS  ATEALIRSRN  VPAIWLANRV420
QRPSLHDLLR  TAGVARLRSE  AHYGLALALG  GGELTMEELA  ELYAMLANGG  LLKPLRYRQD480
DPQLPGTRLL  SPQAAFLVRD  MLRRNPRPDR  RDNGLWPTAW  KTGTSWGFRD  AWTVGLTGDY540
VLAVWIGNFD  GQPNPAFVGI  QAAAPLFFRL  VDALALTRRL  QPPQADQPPP  GLTRIEVCAA600
SGDLPNRWCP  QTAVTWFIPG  KSPIRVSTLH  RPVMIDSRTG  QAACPPFDPA  VTRLEVFAFW660
PSDLQRLFRD  AGLARRQPPE  PAAGCDQPPA  MGNQGDPPRL  NSPLTGVTYT  LRLSKPEETI720
ELSAAIDGDA  QRMYWFADTR  YLGSSRRDGF  LPWRPAASGR  YEVSVVDDQG  RGASRTLEVA780
FVP783

Predicted 3D structure by AlphaFold2 with pLDDT = 89.12 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT51(71-229)

MSRSLGAGGG  PDKRGRRLLA  ATAVFIGFAV  FAGIGLRQLL  PAEPLGPAIP  CSRLLRAADG60
TVLRLTLAGD  GQYRLWTSLD  EIAPAAVEAI  LLKEDRFFHL  HPGVNLQALL  RAAWTTYVRG120
ERQGGSTLSM  QLARRLHRLN  TRTLSGKLKQ  ILLALWLEAR  HSKRELLEAY  CNLAPMGGNI180
EGLGAAARIY  FAKTASQLTV  AESLALAVMP  QNPTKRSDFG  AEQQQARRRL  AQAWRVRHPE240
QSPETILADQ  EIKGLRRGHL  PYLAPHLTDH  LLVRETGRRQ  VIDTTLDSSL  QGLLERLMRQ300
YLTERRHLGM  ANAAALLVDR  RDMGVRALVG  SADYFDPVLH  GQVNGVLAKR  SPGSTLKPFL360
YGLALDQGLI  HPLSMLSDAP  TAFGPFQPEN  FDGRFVGPIS  ATEALIRSRN  VPAIWLANRV420
QRPSLHDLLR  TAGVARLRSE  AHYGLALALG  GGELTMEELA  ELYAMLANGG  LLKPLRYRQD480
DPQLPGTRLL  SPQAAFLVRD  MLRRNPRPDR  RDNGLWPTAW  KTGTSWGFRD  AWTVGLTGDY540
VLAVWIGNFD  GQPNPAFVGI  QAAAPLFFRL  VDALALTRRL  QPPQADQPPP  GLTRIEVCAA600
SGDLPNRWCP  QTAVTWFIPG  KSPIRVSTLH  RPVMIDSRTG  QAACPPFDPA  VTRLEVFAFW660
PSDLQRLFRD  AGLARRQPPE  PAAGCDQPPA  MGNQGDPPRL  NSPLTGVTYT  LRLSKPEETI720
ELSAAIDGDA  QRMYWFADTR  YLGSSRRDGF  LPWRPAASGR  YEVSVVDDQG  RGASRTLEVA780
FVP783

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help