CAZyme3D

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Entry ID

Information for CAZyme ID: ADV84802.1

Basic Information

GenBank IDADV84802.1
FamilyGH57
Sequence Length852
UniProt IDE8V4H8(100,100)Download
Average pLDDT?89.36
CAZy50 ID17670
CAZy50 RepNo, ADW67155.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID401053
KingdomBacteria
PhylumAcidobacteriota
ClassTerriglobia
OrderTerriglobales
FamilyAcidobacteriaceae
GenusTerriglobus
SpeciesTerriglobus saanensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MARTRRLKSR  ADVSPAALGE  RYVCIHGHFY  QPPRENPWLE  TVESQSSAAP  WHDWNERITA60
ECYSPNGASR  ILNEENKIVR  ITNNYARMSF  NFGPTLLSWL  QEFAPRTYTM  ILDADKASAD120
RYSGHGSAMA  QVYNHIIMPL  TSRRDALTQI  RWGIGDFEFR  FGRKPEGMWL  AETAVNHDVL180
DLLAQEGIKF  TVLAPLQAAA  VRPLTKAGAP  EAEWTDVTGG  VVNANTPYLV  KLPEGRSIDV240
FFYDGDGSRA  VAFEGVLDSG  KDFGKRLVSR  FHETEYLEDG  KPLPQIVNIA  TDGESYGHHH300
KHGDMALAYA  MHYLEDKGLA  KLTNYAEFLE  KFPPRMEARV  VEDSSWSCAH  GVERWKSDCG360
CNGGKPGWNQ  KWRAPLRDAL  DRLRDAVDPL  TDQLGGTFFH  DVWAARDAYI  RIILNRSTEN420
EARYFAEFGT  HELTAEERVR  AWELMELQRH  TQLMYTSCGW  FFDDITGIET  VQIIAYAGRV480
LELTHKLFGR  EVATPIQDAF  LATLAEAKSN  IKTPADGAEV  YYQWVQKMFI  GLEQVGAHYA540
ISSIFRPYPE  EGGLFCFDVR  RISEEVFTSG  RGRLAIGRAE  IRSRITEEQE  EVSFAVLHLG600
DQNLSAAVCP  YTEASEVAFA  EFEQNVHTAM  ESANLPEVIR  LIDRYFGQTA  YSLTSLFHDE660
QQRILRSILD  ATVIEVETSL  RTIYEDHSSL  LRFLSRAGME  SPPALALAAG  FALNASFRQA720
LETDPFDSVL  VASLLRRATE  DKVTLNEAEL  SFAAAACMQR  AMHRLEAGAD  ATHPAEAIAQ780
TLDIAETLRD  LPFEVDLWQA  QNIWNDLLRR  GSGYWPSEWR  TSWMRLGEAL  NLDTERLVTE840
SGVSAFAPAT  PL852

Predicted 3D structure by AlphaFold2 with pLDDT = 89.36 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH57(68-356)

MARTRRLKSR  ADVSPAALGE  RYVCIHGHFY  QPPRENPWLE  TVESQSSAAP  WHDWNERITA60
ECYSPNGASR  ILNEENKIVR  ITNNYARMSF  NFGPTLLSWL  QEFAPRTYTM  ILDADKASAD120
RYSGHGSAMA  QVYNHIIMPL  TSRRDALTQI  RWGIGDFEFR  FGRKPEGMWL  AETAVNHDVL180
DLLAQEGIKF  TVLAPLQAAA  VRPLTKAGAP  EAEWTDVTGG  VVNANTPYLV  KLPEGRSIDV240
FFYDGDGSRA  VAFEGVLDSG  KDFGKRLVSR  FHETEYLEDG  KPLPQIVNIA  TDGESYGHHH300
KHGDMALAYA  MHYLEDKGLA  KLTNYAEFLE  KFPPRMEARV  VEDSSWSCAH  GVERWKSDCG360
CNGGKPGWNQ  KWRAPLRDAL  DRLRDAVDPL  TDQLGGTFFH  DVWAARDAYI  RIILNRSTEN420
EARYFAEFGT  HELTAEERVR  AWELMELQRH  TQLMYTSCGW  FFDDITGIET  VQIIAYAGRV480
LELTHKLFGR  EVATPIQDAF  LATLAEAKSN  IKTPADGAEV  YYQWVQKMFI  GLEQVGAHYA540
ISSIFRPYPE  EGGLFCFDVR  RISEEVFTSG  RGRLAIGRAE  IRSRITEEQE  EVSFAVLHLG600
DQNLSAAVCP  YTEASEVAFA  EFEQNVHTAM  ESANLPEVIR  LIDRYFGQTA  YSLTSLFHDE660
QQRILRSILD  ATVIEVETSL  RTIYEDHSSL  LRFLSRAGME  SPPALALAAG  FALNASFRQA720
LETDPFDSVL  VASLLRRATE  DKVTLNEAEL  SFAAAACMQR  AMHRLEAGAD  ATHPAEAIAQ780
TLDIAETLRD  LPFEVDLWQA  QNIWNDLLRR  GSGYWPSEWR  TSWMRLGEAL  NLDTERLVTE840
SGVSAFAPAT  PL852

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help