Information for CAZyme ID: ADV25006.1
Basic Information
| GenBank ID | ADV25006.1 |
| Family | GH18 |
| Sequence Length | 501 |
| UniProt ID | E6RDT9(100,100) |
| Average pLDDT? | 71.24 |
| CAZy50 ID | 62678 |
| CAZy50 Rep | No, AAW46130.2 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 367775 |
| Kingdom | Eukaryota |
| Phylum | Basidiomycota |
| Class | Tremellomycetes |
| Order | Tremellales |
| Family | Cryptococcaceae |
| Genus | Cryptococcus |
| Species | Cryptococcus gattii |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MYFPLLPNLG PITLAIATHS GMMHTRQLLA LAIPFVSLVP VEILANFHQV AVAVTSASAA | 60 |
| GGVTSATVAG GISVTGTGTT GGEAAASSSS RAAVTTARSA VASSASHTNS AASPSGTSTS | 120 |
| NGASGSNRFV TYWDNYANMG GVNAAQLTTV THVILSTLLT HLIVIAFADM TNWATKQTTW | 180 |
| QFMESSDGNF GSSTAATLKG MQSGLKVCGA LGGWGLDSVM VTAVRGGDSS IATFVANVKG | 240 |
| FADYFNLDGI DIDWEFPSAS DDANLITFVT QLRAALGDDK LISIALGARV DTTDAAAFNS | 300 |
| DTFSKLDGLV DMWNVMTYDY VNRYSTATEQ QAGNRVVTTV MDYYEKQGIT MEKCNVGFPM | 360 |
| NAKYFTLTET CDSSNPIGCS LPGREYYEDN GVDNYKSGWV RFNPGLDSTL GTKGTEWATK | 420 |
| MRTQWEARPA DGSTEITADV SNAWVDETNN VFWTWLSDFD MKKTCQNWVT SGKVGGAMVW | 480 |
| SLNQVIISIH SIVYAQMLIH F | 501 |
Predicted 3D structure by AlphaFold2 with pLDDT = 71.24 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH18(127-484)
| MYFPLLPNLG PITLAIATHS GMMHTRQLLA LAIPFVSLVP VEILANFHQV AVAVTSASAA | 60 |
| GGVTSATVAG GISVTGTGTT GGEAAASSSS RAAVTTARSA VASSASHTNS AASPSGTSTS | 120 |
| NGASGSNRFV TYWDNYANMG GVNAAQLTTV THVILSTLLT HLIVIAFADM TNWATKQTTW | 180 |
| QFMESSDGNF GSSTAATLKG MQSGLKVCGA LGGWGLDSVM VTAVRGGDSS IATFVANVKG | 240 |
| FADYFNLDGI DIDWEFPSAS DDANLITFVT QLRAALGDDK LISIALGARV DTTDAAAFNS | 300 |
| DTFSKLDGLV DMWNVMTYDY VNRYSTATEQ QAGNRVVTTV MDYYEKQGIT MEKCNVGFPM | 360 |
| NAKYFTLTET CDSSNPIGCS LPGREYYEDN GVDNYKSGWV RFNPGLDSTL GTKGTEWATK | 420 |
| MRTQWEARPA DGSTEITADV SNAWVDETNN VFWTWLSDFD MKKTCQNWVT SGKVGGAMVW | 480 |
| SLNQVIISIH SIVYAQMLIH F | 501 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.