Information for CAZyme ID: ADP84042.1
Basic Information
| GenBank ID | ADP84042.1 |
| Family | GT51 |
| Sequence Length | 778 |
| UniProt ID | E3J0X8(100,100) |
| Average pLDDT? | 80.32 |
| CAZy50 ID | 13543 |
| CAZy50 Rep | No, CAJ59942.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 298654 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Pseudofrankia |
| Species | Pseudofrankia inefficax |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MLDLPLAPAS TPPPSSPVRA FGGRAAIISL AIALVVALLA LPLVSGLGLF AKASADHYLD | 60 |
| LPSVLATPPL PQNSQILASN GTVVATLHGA ENRVVVEGNQ IPTVMRQAIV AIEDARFYEH | 120 |
| GGFDPKGVLR AALRNSQAGD VQQGGSTLTQ QYVKNVLLQN ATTPAERKAA TDPSVGRKIQ | 180 |
| ELRYASALEK ILPKDEILTR YLNIAYFGDG AYGVGTAAEH YFNVNVKDLT LGQAALLAGL | 240 |
| VQSPSRYDPT TNKAAATTRR NEVLDHMVTS KYISATQATG AKQLPITLNT TEGTTLDSCS | 300 |
| NSIAPFFCDY VRTELSSDPA LGSTKEERQR RLYEGGLQIH TTLDMKAQEA AQNAVDTTIG | 360 |
| RDSRAVAPIV VVQPGTGNIL AMAENRNFGA DTSQNQTKIN LPAFAPSTGG FEPGSAFKAF | 420 |
| TMATALEQGY GLSTGFYSPS CLNADTWPEI KSIFPITTDD KKCPDGYSNS ADSESGAFDM | 480 |
| RDGTWQSVNT YYIQLEAKVG VTNVWAMARR LGIPQSDAPT DANGKVELGP TFGGLTLSQN | 540 |
| TQIAPLDMAS AYAVFASGGK YCTPRFVTSA TDSSKENVDI APKPECKQAI SEGIADTVAS | 600 |
| VLAGVITNGT GSPNANIGRP AAGKTGTNDN YSSAWFVGFT PQMAAAVALG DPRGSKYNLA | 660 |
| GLKADGKTWP EVFGGGLPAL IFSRTLKPAL QGTPVEPLPK ADPTVAQGTK GGFQTDGAAA | 720 |
| PPPSPGVLID PLTGQPITAP SGQPGTVTVT PLTPGQGGDT TGPRLPGQGD GNGNGNGH | 778 |
Predicted 3D structure by AlphaFold2 with pLDDT = 80.32 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT51(81-268)
| MLDLPLAPAS TPPPSSPVRA FGGRAAIISL AIALVVALLA LPLVSGLGLF AKASADHYLD | 60 |
| LPSVLATPPL PQNSQILASN GTVVATLHGA ENRVVVEGNQ IPTVMRQAIV AIEDARFYEH | 120 |
| GGFDPKGVLR AALRNSQAGD VQQGGSTLTQ QYVKNVLLQN ATTPAERKAA TDPSVGRKIQ | 180 |
| ELRYASALEK ILPKDEILTR YLNIAYFGDG AYGVGTAAEH YFNVNVKDLT LGQAALLAGL | 240 |
| VQSPSRYDPT TNKAAATTRR NEVLDHMVTS KYISATQATG AKQLPITLNT TEGTTLDSCS | 300 |
| NSIAPFFCDY VRTELSSDPA LGSTKEERQR RLYEGGLQIH TTLDMKAQEA AQNAVDTTIG | 360 |
| RDSRAVAPIV VVQPGTGNIL AMAENRNFGA DTSQNQTKIN LPAFAPSTGG FEPGSAFKAF | 420 |
| TMATALEQGY GLSTGFYSPS CLNADTWPEI KSIFPITTDD KKCPDGYSNS ADSESGAFDM | 480 |
| RDGTWQSVNT YYIQLEAKVG VTNVWAMARR LGIPQSDAPT DANGKVELGP TFGGLTLSQN | 540 |
| TQIAPLDMAS AYAVFASGGK YCTPRFVTSA TDSSKENVDI APKPECKQAI SEGIADTVAS | 600 |
| VLAGVITNGT GSPNANIGRP AAGKTGTNDN YSSAWFVGFT PQMAAAVALG DPRGSKYNLA | 660 |
| GLKADGKTWP EVFGGGLPAL IFSRTLKPAL QGTPVEPLPK ADPTVAQGTK GGFQTDGAAA | 720 |
| PPPSPGVLID PLTGQPITAP SGQPGTVTVT PLTPGQGGDT TGPRLPGQGD GNGNGNGH | 778 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.