Information for CAZyme ID: ADP81454.1
Basic Information
| GenBank ID | ADP81454.1 |
| Family | GH78 |
| Sequence Length | 834 |
| UniProt ID | E3IXZ9(100,100) |
| Average pLDDT? | 93.93 |
| CAZy50 ID | 2599 |
| CAZy50 Rep | No, SDS97270.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 298654 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Pseudofrankia |
| Species | Pseudofrankia inefficax |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTEPWQAAFI TSPTDGSGPP AASSPAPYLR RVFAVGPGLR RATLRVTALG LVEAYMNGTR | 60 |
| VGDEVLAPGW TSYHHRLVVG SHDVTDLLAA GANALGLILG EGWAVGRLTW EEGKRAVWAD | 120 |
| RPAGFAQLEL DYGDRVEVVG SGADWRAGTG AILADSLYDG ETFDARREPA GWSEPGFDDS | 180 |
| GWSLVEVVDR DLTTLVAPSA PPIRRVQELP AAEVLTTPAG RTVVDFGQNL SGWVRLTVRG | 240 |
| EAGTVLTLRH AETMIDGEAD FRTNRTALAT DRYILRGGGP ETWEPRFTFH GFRYVDVEGW | 300 |
| PGVLDPGALT AVVIHSDLRR TGWFETSNEL VNQLHRNVVW SMRGNFVGVP TDCPQRDERL | 360 |
| GWTGDLNAFA PTAAFLYDVG AMLGSWLTDL AAEQRAQGHV PLVVPDVGGM PISTPTALWG | 420 |
| DVAVSLPWTL YQQYGDPEIL TRQYGSMRAF VDSVASRLDE RGLWSTGFQF GDWLDPDAPP | 480 |
| NNPAGGKTDP YLVANAYLCR VTWQLAQAAE ILGQAGDAER YSALHERVRG AFRDEWVTPA | 540 |
| GLVANDTVTA YALAICFDLL DPAQQARAGR RLADLVTRAE YRISTGFAGT PLVGHALSRT | 600 |
| AQLDTAYRLL LRTECPSFLY PVTQGATTIW ERWDAIQPDG TLNDTGMTSL NHYALGAIAD | 660 |
| WLHRVVGGLE PTEPGYRRMR IAPRPGGGLT HATLVHDTPH GQVRVAWRLG PAGSVTLDAT | 720 |
| IPPGTAADVV LPNHPDQLTV SVGPGTHQWR YEIPVPAPRA YSLDTPLKEL FADEALWDRL | 780 |
| HRVIGTHLPQ FANANSGSEP SLPNLRALLG YFAASAPGLE ADLVATLQTE PAQS | 834 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.93 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM67(8-189)+GH78(215-731)
| MTEPWQAAFI TSPTDGSGPP AASSPAPYLR RVFAVGPGLR RATLRVTALG LVEAYMNGTR | 60 |
| VGDEVLAPGW TSYHHRLVVG SHDVTDLLAA GANALGLILG EGWAVGRLTW EEGKRAVWAD | 120 |
| RPAGFAQLEL DYGDRVEVVG SGADWRAGTG AILADSLYDG ETFDARREPA GWSEPGFDDS | 180 |
| GWSLVEVVDR DLTTLVAPSA PPIRRVQELP AAEVLTTPAG RTVVDFGQNL SGWVRLTVRG | 240 |
| EAGTVLTLRH AETMIDGEAD FRTNRTALAT DRYILRGGGP ETWEPRFTFH GFRYVDVEGW | 300 |
| PGVLDPGALT AVVIHSDLRR TGWFETSNEL VNQLHRNVVW SMRGNFVGVP TDCPQRDERL | 360 |
| GWTGDLNAFA PTAAFLYDVG AMLGSWLTDL AAEQRAQGHV PLVVPDVGGM PISTPTALWG | 420 |
| DVAVSLPWTL YQQYGDPEIL TRQYGSMRAF VDSVASRLDE RGLWSTGFQF GDWLDPDAPP | 480 |
| NNPAGGKTDP YLVANAYLCR VTWQLAQAAE ILGQAGDAER YSALHERVRG AFRDEWVTPA | 540 |
| GLVANDTVTA YALAICFDLL DPAQQARAGR RLADLVTRAE YRISTGFAGT PLVGHALSRT | 600 |
| AQLDTAYRLL LRTECPSFLY PVTQGATTIW ERWDAIQPDG TLNDTGMTSL NHYALGAIAD | 660 |
| WLHRVVGGLE PTEPGYRRMR IAPRPGGGLT HATLVHDTPH GQVRVAWRLG PAGSVTLDAT | 720 |
| IPPGTAADVV LPNHPDQLTV SVGPGTHQWR YEIPVPAPRA YSLDTPLKEL FADEALWDRL | 780 |
| HRVIGTHLPQ FANANSGSEP SLPNLRALLG YFAASAPGLE ADLVATLQTE PAQS | 834 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.