Information for CAZyme ID: ADP81430.1
Basic Information
| GenBank ID | ADP81430.1 |
| Family | GH3 |
| Sequence Length | 759 |
| UniProt ID | E3IXX5(100,100) |
| Average pLDDT? | 91.91 |
| CAZy50 ID | 2599 |
| CAZy50 Rep | No, SDS97270.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 298654 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Pseudofrankia |
| Species | Pseudofrankia inefficax |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MDNAETGSLS REEKVSLLSG QDLWRTKALP AAGIRSITLT DGPHGLRYQG EAGDHLGLTG | 60 |
| SQPATCFPPA VAVGSSWDPA VARAIGAALA AEATALGVDV VLGPGVNIKR SPLCGRNFEY | 120 |
| YSEDPLLSGV LGAAHVRGLE DNGVGSSVKH FAANNQETDR MSVSAEVDER TLREIYLPAF | 180 |
| ERVVTEARPA TVMCAYNRLN GTFAAEHPWL LTRVLREEWG FDGVVVSDWG AVHDRVAALA | 240 |
| AGLDLQMPYD GGAGDEAVVD ALRRGEIGDD TVDVAVGRLL RLVRRGERTA APVDWDAHHA | 300 |
| LARSLGPPCM VLLKNEGPVL PLRGGETVAV VGAFATRPRF QGGGSSKVAP ARVDVPLDEI | 360 |
| TAAAVARGGR VVHAPGFPAH AAEADVAARD EAVALAGTAA VTVVFAGLPD GAESEGYDRR | 420 |
| SLELPAAQVA LIRAVAAAAR RTVVVLAHGG VVSLEGWHEH VDAILDTFLL GQAGGGAIAD | 480 |
| VLFGVAEPSG RLAESIPRRL RDTAAFLNFP GELGSVRYGE GVMVGYRYHV TAQIPARYPF | 540 |
| GHGLGYGRVE TSDLRVQPAG ADGAHVEVDL RNVGDRETSH VVQLYVATQA GPVRRASREL | 600 |
| RAFEKVRLAP GQTTTVTFDL DRRAFAYWDV RHGRWVVAAG DYGIQIGRDA QTVLLEQSLT | 660 |
| LAGDHIVPVL SIDSLIGDWF SHPAVGPSME KALRTALAPL AADFAGTEPP EALGGEADPL | 720 |
| RAIPLRQLLD LLGGALPAGG LDEVRRIAVS HLAAAFARA | 759 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.91 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH3(30-248)
| MDNAETGSLS REEKVSLLSG QDLWRTKALP AAGIRSITLT DGPHGLRYQG EAGDHLGLTG | 60 |
| SQPATCFPPA VAVGSSWDPA VARAIGAALA AEATALGVDV VLGPGVNIKR SPLCGRNFEY | 120 |
| YSEDPLLSGV LGAAHVRGLE DNGVGSSVKH FAANNQETDR MSVSAEVDER TLREIYLPAF | 180 |
| ERVVTEARPA TVMCAYNRLN GTFAAEHPWL LTRVLREEWG FDGVVVSDWG AVHDRVAALA | 240 |
| AGLDLQMPYD GGAGDEAVVD ALRRGEIGDD TVDVAVGRLL RLVRRGERTA APVDWDAHHA | 300 |
| LARSLGPPCM VLLKNEGPVL PLRGGETVAV VGAFATRPRF QGGGSSKVAP ARVDVPLDEI | 360 |
| TAAAVARGGR VVHAPGFPAH AAEADVAARD EAVALAGTAA VTVVFAGLPD GAESEGYDRR | 420 |
| SLELPAAQVA LIRAVAAAAR RTVVVLAHGG VVSLEGWHEH VDAILDTFLL GQAGGGAIAD | 480 |
| VLFGVAEPSG RLAESIPRRL RDTAAFLNFP GELGSVRYGE GVMVGYRYHV TAQIPARYPF | 540 |
| GHGLGYGRVE TSDLRVQPAG ADGAHVEVDL RNVGDRETSH VVQLYVATQA GPVRRASREL | 600 |
| RAFEKVRLAP GQTTTVTFDL DRRAFAYWDV RHGRWVVAAG DYGIQIGRDA QTVLLEQSLT | 660 |
| LAGDHIVPVL SIDSLIGDWF SHPAVGPSME KALRTALAPL AADFAGTEPP EALGGEADPL | 720 |
| RAIPLRQLLD LLGGALPAGG LDEVRRIAVS HLAAAFARA | 759 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.