Information for CAZyme ID: ADO72996.1
Basic Information
| GenBank ID | ADO72996.1 |
| Family | GH87 |
| Sequence Length | 553 |
| UniProt ID | E3FLA4(100,100) |
| Average pLDDT? | 81.21 |
| CAZy50 ID | 40738 |
| CAZy50 Rep | No, ATB32642.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 378806 |
| Kingdom | Bacteria |
| Phylum | Myxococcota |
| Class | Myxococcia |
| Order | Myxococcales |
| Family | Archangiaceae |
| Genus | Stigmatella |
| Species | Stigmatella aurantiaca |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MNSDFAWLYT GPNNTETHNA FPRQQVDELP QNPSSSDEGF GLKLPWSSAH HIYDEAHVLL | 60 |
| ATDGRATINE GDVVKIISPD ASTALPVTID FMDLELVPEP LSAPANYVVV SEFTEAAVVQ | 120 |
| ALQDAVNGGK PGIFLPPGDY VMAHVNPALP KVYVPAGLTV QGAGMWYTRF VPPPPQQVGY | 180 |
| NYEFGFRLSG DNITFQDFAI FGTWRNRAAR YNKAAADLGN WPWDSYDGIG RAFDRYMHNN | 240 |
| AVFKRLWIER MIVGGWVEGG NNMLWQDSRF RNTLADGINF CNGTTNSRIV NCTARNNGDD | 300 |
| AFAMWSAITW DKAPIGSTPW VKQPEGPNQG NVIERCTAGL IWRAAGFAIY GGHDNVVKDS | 360 |
| VVYDTLRYPG ITVDNEFAPQ HEFSGLTTFQ NMTVERCGGR MWWDDDGVSG DETKRLKWGA | 420 |
| VWLFAANPYS PAEPYSPIRF QGIRLNDIDI IDPVYYGVLV QTTQGQRVED TELDDVHIAM | 480 |
| DQSGEFGMVA NDSHKAPPSP FTGKIGTAGS LTLKNSSITG ARANSGNMFM KDEVSTGTFS | 540 |
| FKDGGGNLWT GDR | 553 |
Predicted 3D structure by AlphaFold2 with pLDDT = 81.21 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH87(46-527)
| MNSDFAWLYT GPNNTETHNA FPRQQVDELP QNPSSSDEGF GLKLPWSSAH HIYDEAHVLL | 60 |
| ATDGRATINE GDVVKIISPD ASTALPVTID FMDLELVPEP LSAPANYVVV SEFTEAAVVQ | 120 |
| ALQDAVNGGK PGIFLPPGDY VMAHVNPALP KVYVPAGLTV QGAGMWYTRF VPPPPQQVGY | 180 |
| NYEFGFRLSG DNITFQDFAI FGTWRNRAAR YNKAAADLGN WPWDSYDGIG RAFDRYMHNN | 240 |
| AVFKRLWIER MIVGGWVEGG NNMLWQDSRF RNTLADGINF CNGTTNSRIV NCTARNNGDD | 300 |
| AFAMWSAITW DKAPIGSTPW VKQPEGPNQG NVIERCTAGL IWRAAGFAIY GGHDNVVKDS | 360 |
| VVYDTLRYPG ITVDNEFAPQ HEFSGLTTFQ NMTVERCGGR MWWDDDGVSG DETKRLKWGA | 420 |
| VWLFAANPYS PAEPYSPIRF QGIRLNDIDI IDPVYYGVLV QTTQGQRVED TELDDVHIAM | 480 |
| DQSGEFGMVA NDSHKAPPSP FTGKIGTAGS LTLKNSSITG ARANSGNMFM KDEVSTGTFS | 540 |
| FKDGGGNLWT GDR | 553 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.