Information for CAZyme ID: ADN76372.1
Basic Information
| GenBank ID | ADN76372.1 |
| Family | CBM13 |
| Sequence Length | 988 |
| UniProt ID | E1SVP1(100,100) |
| Average pLDDT? | 89.64 |
| CAZy50 ID | 13881 |
| CAZy50 Rep | No, UXD88770.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 550540 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Ferrimonadaceae |
| Genus | Ferrimonas |
| Species | Ferrimonas balearica |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MDLSAIGSFA AGHRRHLGVV ALVAFPLLSP SAALADSAES AVNQLAQGCY AIQSPTNGHY | 60 |
| MRQFHQGGTV DDGLSYRFDA VDLADASHFY FKPSRAQHFM LTDRGGRFLA SHLPAEVSAG | 120 |
| RYPGEYAEWR ISAEVGEGVQ YRFHGIGLDR QLRHNYSGGG LYFFDLLNPN DNNSEASFTL | 180 |
| VAQDDCEPFP EIMVNAEGDL DALKGDVSAP VRGLADPHTH ITSYEFMGGK LMHGKPFHRW | 240 |
| GVSHALPDSE PIHGPDGSLD LVGNLYAYGD ANFRYDTRGW PDFPFWPNHV QLTHSGYYYK | 300 |
| WMERAWAGGL RLMVTHLVEN EVLCTAQATI NPASWVNPNS CNTMESIQLQ IQRMHEIEEY | 360 |
| IDVQSGGPGQ GFFRIVHSPE EARAVIADGK LAVLMGIEAS EVFNCGEKDD CNRRQIEAQL | 420 |
| QAVYDAGVRV LYPTHKFDNQ LAGSRVEDGF INLGQVLSTG HFFETEECDA ETRGNSFTSG | 480 |
| FPLIGEVPVL KDILDGVGLN PQYDESIQHC NKHGLSEKGV YLVNRMIDMG MLIELDHMSA | 540 |
| HTATEVMDIV EARGYSGVIT SHSWMNGGTN GLHPNTVRLL EAGGFAAPYN SNANSVGGAI | 600 |
| QRYLDVITNT PYLAGVGLGT DMSGLGGQAG PRSDSDVDPL LYPFTSEFGI TFDRQQSGNR | 660 |
| TFDFNQDGMA HYGMLADHIE DVRQQQGGAV YEAVMNSAEA YLQMWERAEA HDDPQYVNPL | 720 |
| PTFVRIVNRE SGRCMDIPGN GSEMVNGTDV ILYDCEKNAW DQRWFYDETA RQFQNKANRA | 780 |
| LCLDNRGQAY DGGEVVVWEC VDSDNLRWDY DGRFIRSAHN PNIVADAYGT GNDSEIGQWS | 840 |
| LHGKANQQWL LRPEMTIHRW VSLRDKRAGL CISAPESGAA GSPITVQACQ NRPGQKWYFD | 900 |
| PIAGTLRSDL AGNLCLSIPN GNAVEGQQLA LAACDANAPE QAFDKEGKIF SARLASGQVL | 960 |
| DASGEGAGAA VILYGRHDGD NQKWRSSL | 988 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.64 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM13(723-853)+CBM13(857-985)
| MDLSAIGSFA AGHRRHLGVV ALVAFPLLSP SAALADSAES AVNQLAQGCY AIQSPTNGHY | 60 |
| MRQFHQGGTV DDGLSYRFDA VDLADASHFY FKPSRAQHFM LTDRGGRFLA SHLPAEVSAG | 120 |
| RYPGEYAEWR ISAEVGEGVQ YRFHGIGLDR QLRHNYSGGG LYFFDLLNPN DNNSEASFTL | 180 |
| VAQDDCEPFP EIMVNAEGDL DALKGDVSAP VRGLADPHTH ITSYEFMGGK LMHGKPFHRW | 240 |
| GVSHALPDSE PIHGPDGSLD LVGNLYAYGD ANFRYDTRGW PDFPFWPNHV QLTHSGYYYK | 300 |
| WMERAWAGGL RLMVTHLVEN EVLCTAQATI NPASWVNPNS CNTMESIQLQ IQRMHEIEEY | 360 |
| IDVQSGGPGQ GFFRIVHSPE EARAVIADGK LAVLMGIEAS EVFNCGEKDD CNRRQIEAQL | 420 |
| QAVYDAGVRV LYPTHKFDNQ LAGSRVEDGF INLGQVLSTG HFFETEECDA ETRGNSFTSG | 480 |
| FPLIGEVPVL KDILDGVGLN PQYDESIQHC NKHGLSEKGV YLVNRMIDMG MLIELDHMSA | 540 |
| HTATEVMDIV EARGYSGVIT SHSWMNGGTN GLHPNTVRLL EAGGFAAPYN SNANSVGGAI | 600 |
| QRYLDVITNT PYLAGVGLGT DMSGLGGQAG PRSDSDVDPL LYPFTSEFGI TFDRQQSGNR | 660 |
| TFDFNQDGMA HYGMLADHIE DVRQQQGGAV YEAVMNSAEA YLQMWERAEA HDDPQYVNPL | 720 |
| PTFVRIVNRE SGRCMDIPGN GSEMVNGTDV ILYDCEKNAW DQRWFYDETA RQFQNKANRA | 780 |
| LCLDNRGQAY DGGEVVVWEC VDSDNLRWDY DGRFIRSAHN PNIVADAYGT GNDSEIGQWS | 840 |
| LHGKANQQWL LRPEMTIHRW VSLRDKRAGL CISAPESGAA GSPITVQACQ NRPGQKWYFD | 900 |
| PIAGTLRSDL AGNLCLSIPN GNAVEGQQLA LAACDANAPE QAFDKEGKIF SARLASGQVL | 960 |
| DASGEGAGAA VILYGRHDGD NQKWRSSL | 988 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.