CAZyme3D

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Entry ID

Information for CAZyme ID: ADL46870.1

Basic Information

GenBank IDADL46870.1
FamilyGH81
Sequence Length1004
UniProt IDD9TEI6(100,100)Download
Average pLDDT?89.49
CAZy50 ID6235
CAZy50 RepNo, UUI74322.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID644283
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora aurantiaca

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MNLLRDFSPD  PVPPTAPVPS  PARRRGLRAT  ALVAASVLAA  GLLGAVAGGG  GTATAGAVGA60
GSYTETLPPG  AQLPKGCGAI  STNPRIFTTP  DAPAGAIPTN  DWWSSLIWKR  NNCAGSENLH120
AHPLAFKAEN  NGLGLSYTTT  PAISGTATGV  GEFHYPYGED  VRVGMPGLSA  PVVKAADWSD180
WTVTADWSDG  SRTMRATIGH  GLPFSYYTVS  GGTAQLTATA  TPTVWRNSGA  TIGFTVNGHD240
YVAYAPTGAT  WTVNGAGISS  TLAGKGYFSV  AVLPGGGDRA  ALADTYGRYA  HAHVTGTRMS300
YTYDPSAGTV  RTTYAFTTTP  REGSETKTVV  ALYPHQWRSL  TGATPITPTY  VSARGAMRVL360
TGVPSFTTTM  RFTGVLPEVP  AVGDSSGADL  ATVTGYLNAE  QGNPEGVSGR  DTYWAGKGLG420
RAARIAEIAD  QLGQTPVRDA  AVTAMKNRLT  NWLTAGSGET  SQLFYYDRNW  GTLIGYPASY480
GSDEDLNDHH  FHYGYFIAAA  ATVAKFDPGW  ADDSRYGGMI  DLLIRDANNY  DRADSRFPYL540
RDFDIYAGHD  WASGLAPFFA  GNNQESSSEG  MNFANALIQW  GQATGDTAVR  DAGVYLWTTQ600
SAAISEYWFD  VYDQNFPAAF  GHKTVGMVWG  DGGAYATWFS  SAPEMIQGIN  MLPITGGHLY660
LGDHPEYVKA  NYAELVTNKG  GPPTVWQDII  WEFLALGDGE  QALRNFRANS  GFTSEEGESK720
AHTFHWIRNL  AALGTVDTTV  TANHPLAKVF  VKNGARTYVA  SNITARPLTV  TFSNGTTLTV780
PAGRTATSGA  YAWSGGDATG  GVTVPTGPPP  TSTPTPTPTT  ASPTPTTASP  TPTPTPTTAS840
PTPSTGTPLT  PVRYLRTGGG  LDGSAGTAGT  VNVAAANGNS  DGTPANPQVF  TATGLTGTYT900
GGATAFDLAV  DAGTAIGNGV  QIRVSYDLTG  NGSVERVETY  RYFATDPIPV  AERYRQTQGL960
LSATGTLGNL  SGGTVRVEVW  NAIGGAPTIL  GVGNASTVTL  PYGS1004

Predicted 3D structure by AlphaFold2 with pLDDT = 89.49 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH81(83-725)

MNLLRDFSPD  PVPPTAPVPS  PARRRGLRAT  ALVAASVLAA  GLLGAVAGGG  GTATAGAVGA60
GSYTETLPPG  AQLPKGCGAI  STNPRIFTTP  DAPAGAIPTN  DWWSSLIWKR  NNCAGSENLH120
AHPLAFKAEN  NGLGLSYTTT  PAISGTATGV  GEFHYPYGED  VRVGMPGLSA  PVVKAADWSD180
WTVTADWSDG  SRTMRATIGH  GLPFSYYTVS  GGTAQLTATA  TPTVWRNSGA  TIGFTVNGHD240
YVAYAPTGAT  WTVNGAGISS  TLAGKGYFSV  AVLPGGGDRA  ALADTYGRYA  HAHVTGTRMS300
YTYDPSAGTV  RTTYAFTTTP  REGSETKTVV  ALYPHQWRSL  TGATPITPTY  VSARGAMRVL360
TGVPSFTTTM  RFTGVLPEVP  AVGDSSGADL  ATVTGYLNAE  QGNPEGVSGR  DTYWAGKGLG420
RAARIAEIAD  QLGQTPVRDA  AVTAMKNRLT  NWLTAGSGET  SQLFYYDRNW  GTLIGYPASY480
GSDEDLNDHH  FHYGYFIAAA  ATVAKFDPGW  ADDSRYGGMI  DLLIRDANNY  DRADSRFPYL540
RDFDIYAGHD  WASGLAPFFA  GNNQESSSEG  MNFANALIQW  GQATGDTAVR  DAGVYLWTTQ600
SAAISEYWFD  VYDQNFPAAF  GHKTVGMVWG  DGGAYATWFS  SAPEMIQGIN  MLPITGGHLY660
LGDHPEYVKA  NYAELVTNKG  GPPTVWQDII  WEFLALGDGE  QALRNFRANS  GFTSEEGESK720
AHTFHWIRNL  AALGTVDTTV  TANHPLAKVF  VKNGARTYVA  SNITARPLTV  TFSNGTTLTV780
PAGRTATSGA  YAWSGGDATG  GVTVPTGPPP  TSTPTPTPTT  ASPTPTTASP  TPTPTPTTAS840
PTPSTGTPLT  PVRYLRTGGG  LDGSAGTAGT  VNVAAANGNS  DGTPANPQVF  TATGLTGTYT900
GGATAFDLAV  DAGTAIGNGV  QIRVSYDLTG  NGSVERVETY  RYFATDPIPV  AERYRQTQGL960
LSATGTLGNL  SGGTVRVEVW  NAIGGAPTIL  GVGNASTVTL  PYGS1004

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help