CAZyme3D

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Entry ID

Information for CAZyme ID: ADL44797.1

Basic Information

GenBank IDADL44797.1
FamilyGH3
Sequence Length484
UniProt IDD9TE68(100,100)Download
Average pLDDT?93.32
CAZy50 ID53852
CAZy50 RepNo, BCJ54538.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID644283
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora aurantiaca

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MGLDPGLRRL  ALGTLLAAYP  GPVPPDWAVD  LLADGLAGHT  LFGTNIHDPA  QVAASTAALR60
AGRPDVIVAI  DEEGGDVTRL  AHATGSPYPG  NAALGAVDDP  DLTRQVYAAI  GAELAALGIT120
VDLAPTVDVN  TADENPVIGT  RSFGADPKRV  AVHSAAAVAG  LQSTGVAACA  KHFPGHGATV180
ADSHHELPTV  DVPPAVLRER  DLPPFAAVVD  AGVRAVMTAH  IRVPALTGDG  PATFSRAVLH240
DLLRVEYGFT  GAIITDALEM  KGAVLAAGGV  GAGAVRALAA  GADLLCIGAR  VDAELVESVA300
AEIVAAITDG  RLARERVEEA  AGRTAALAAA  TGPADAPPPA  ADGLGYAAAL  RAVRVEGDLT360
RDTAPLVVQV  HATSTIAEGR  VPWGLGPHLA  AGVEQARAVA  GDTDPDQLRR  LAGDRPVVLV420
GRHLHRLPGA  RELVEALAAT  HQVTVVEMGW  PGAWRPAGAR  AFVATHGASH  ANGRAAADAL480
GLTA484

Predicted 3D structure by AlphaFold2 with pLDDT = 93.32 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH3(60-286)

MGLDPGLRRL  ALGTLLAAYP  GPVPPDWAVD  LLADGLAGHT  LFGTNIHDPA  QVAASTAALR60
AGRPDVIVAI  DEEGGDVTRL  AHATGSPYPG  NAALGAVDDP  DLTRQVYAAI  GAELAALGIT120
VDLAPTVDVN  TADENPVIGT  RSFGADPKRV  AVHSAAAVAG  LQSTGVAACA  KHFPGHGATV180
ADSHHELPTV  DVPPAVLRER  DLPPFAAVVD  AGVRAVMTAH  IRVPALTGDG  PATFSRAVLH240
DLLRVEYGFT  GAIITDALEM  KGAVLAAGGV  GAGAVRALAA  GADLLCIGAR  VDAELVESVA300
AEIVAAITDG  RLARERVEEA  AGRTAALAAA  TGPADAPPPA  ADGLGYAAAL  RAVRVEGDLT360
RDTAPLVVQV  HATSTIAEGR  VPWGLGPHLA  AGVEQARAVA  GDTDPDQLRR  LAGDRPVVLV420
GRHLHRLPGA  RELVEALAAT  HQVTVVEMGW  PGAWRPAGAR  AFVATHGASH  ANGRAAADAL480
GLTA484

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help