Information for CAZyme ID: ADL25196.1
Basic Information
| GenBank ID | ADL25196.1 |
| Family | CBM6 |
| Sequence Length | 552 |
| UniProt ID | Q9F4L1(100,100) |
| Average pLDDT? | 86.25 |
| CAZy50 ID | 59197 |
| CAZy50 Rep | No, AAG02559.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 59374 |
| Kingdom | Bacteria |
| Phylum | Fibrobacterota |
| Class | Fibrobacteria |
| Order | Fibrobacterales |
| Family | Fibrobacteraceae |
| Genus | Fibrobacter |
| Species | Fibrobacter succinogenes |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKKRVLGLAF LLCANSFAVT SQFRGVNWAD KRDNFVSDVL VLSGLSLSDN HESAYAIADR | 60 |
| IVGQFQEVLG TNSVRMPVNE PTILKAFDMY SGALDAALEH GRVAMGYWGP AQPAGPKNMD | 120 |
| DWWKMWAKLV ETYGDHPNAY FEIFNEPHMY NKTDLRNLYA DWLKKFPNVP RDHILLDGSG | 180 |
| LAWNVPDIAD DPRFEGCLFA VHEYTFWNMS ITTEQGWKNS FKGKVGKYID RTVCTEWGGA | 240 |
| MSPGDKAGVH YDYQDYNKAP TNYFTAYIRG MSDQLREWEM GSFYWPGLRD GDWYSMTKRS | 300 |
| GEGVNTKLQI VNQSGVDRMQ MAWADTVETT PPQQDPFGGF DADGKPVAGK AITIPGTLEA | 360 |
| ENYDLGGSRV SFYDKSSTNE GGAYRKDAVD IVVLDSADLS KGYALGYTQD GEWLEYTVNV | 420 |
| AKTAKFTVEV QMATASEKAG VQLFIDNKAV SDGIIAKQGE DWSTYTAVQS QLGEIAAGEH | 480 |
| VLKMQIVGNY VNIDNIRFCE GEKCEETVGI RANRASSVRT LENSSPRLRV QNNKLFVEKN | 540 |
| GLRFDLTGHR IK | 552 |
Predicted 3D structure by AlphaFold2 with pLDDT = 86.25 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH5(22-297)+CBM6(360-498)
| MKKRVLGLAF LLCANSFAVT SQFRGVNWAD KRDNFVSDVL VLSGLSLSDN HESAYAIADR | 60 |
| IVGQFQEVLG TNSVRMPVNE PTILKAFDMY SGALDAALEH GRVAMGYWGP AQPAGPKNMD | 120 |
| DWWKMWAKLV ETYGDHPNAY FEIFNEPHMY NKTDLRNLYA DWLKKFPNVP RDHILLDGSG | 180 |
| LAWNVPDIAD DPRFEGCLFA VHEYTFWNMS ITTEQGWKNS FKGKVGKYID RTVCTEWGGA | 240 |
| MSPGDKAGVH YDYQDYNKAP TNYFTAYIRG MSDQLREWEM GSFYWPGLRD GDWYSMTKRS | 300 |
| GEGVNTKLQI VNQSGVDRMQ MAWADTVETT PPQQDPFGGF DADGKPVAGK AITIPGTLEA | 360 |
| ENYDLGGSRV SFYDKSSTNE GGAYRKDAVD IVVLDSADLS KGYALGYTQD GEWLEYTVNV | 420 |
| AKTAKFTVEV QMATASEKAG VQLFIDNKAV SDGIIAKQGE DWSTYTAVQS QLGEIAAGEH | 480 |
| VLKMQIVGNY VNIDNIRFCE GEKCEETVGI RANRASSVRT LENSSPRLRV QNNKLFVEKN | 540 |
| GLRFDLTGHR IK | 552 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.