CAZyme3D

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Entry ID

Information for CAZyme ID: ADI32161.1

Basic Information

GenBank IDADI32161.1
FamilyGH1
Sequence Length421
UniProt IDD7D8R5(100,100)Download
Average pLDDT?97.30
CAZy50 ID88813
CAZy50 RepNo, CAT81439.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID591019
KingdomArchaea
PhylumThermoproteota
ClassThermoprotei
OrderDesulfurococcales
FamilyDesulfurococcaceae
GenusStaphylothermus
SpeciesStaphylothermus hellenicus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MIRFPDYFLF  GTATSSHQIE  GNNIFNDWWE  WETKGKLKVR  SGRACNHWEL  YKEDIQLMAE60
LGYSAYRFSI  EWSRIFPRKD  HIDYDSLNKY  KEIVNLLRKY  GIEPVITLHH  FTNPQWFMKI120
GGWTREENIK  YFIEYVELIA  SEIKDAKIWI  TINEPIIYVL  QGYISGEWPP  GIKNLKIADQ180
VTKNLLKAHN  EAYNILHKHG  VVGIAKNMIA  FKPGSNKRKD  IDMYNKVDKA  FNWGFLDGIL240
MGELETLHGK  YRVEPGNIDF  IGINYYSSYL  VKYTWNPFKL  HIKVEPLDTG  LWTTMGYCIY300
PRGIYEVVMK  THERYGKEII  ITENGVAVEN  DELRILSIIR  HLQYLYKAMN  EGANVKGYFY360
WSLMDNFEWD  KGFDQRFGLV  EVDYKTFERK  PRKSAYVYSQ  IARSKTISDE  YLEKYGLKNP420
E421

Predicted 3D structure by AlphaFold2 with pLDDT = 97.30 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH1(3-405)

MIRFPDYFLF  GTATSSHQIE  GNNIFNDWWE  WETKGKLKVR  SGRACNHWEL  YKEDIQLMAE60
LGYSAYRFSI  EWSRIFPRKD  HIDYDSLNKY  KEIVNLLRKY  GIEPVITLHH  FTNPQWFMKI120
GGWTREENIK  YFIEYVELIA  SEIKDAKIWI  TINEPIIYVL  QGYISGEWPP  GIKNLKIADQ180
VTKNLLKAHN  EAYNILHKHG  VVGIAKNMIA  FKPGSNKRKD  IDMYNKVDKA  FNWGFLDGIL240
MGELETLHGK  YRVEPGNIDF  IGINYYSSYL  VKYTWNPFKL  HIKVEPLDTG  LWTTMGYCIY300
PRGIYEVVMK  THERYGKEII  ITENGVAVEN  DELRILSIIR  HLQYLYKAMN  EGANVKGYFY360
WSLMDNFEWD  KGFDQRFGLV  EVDYKTFERK  PRKSAYVYSQ  IARSKTISDE  YLEKYGLKNP420
E421

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help