CAZyme3D

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Entry ID

Information for CAZyme ID: ADF49631.1

Basic Information

GenBank IDADF49631.1
FamilyCBM70, PL8
Sequence Length522
UniProt IDD5LKE5(100,100)Download
Average pLDDT?78.79
CAZy50 ID7821
CAZy50 RepNo, BBA92284.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1307
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus suis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MGFFISQSKQ  HYGIRKYKVG  VCSALIALSI  LGTRVAANQL  PSTETASPQS  SQLVETTPET60
TEAVNLTTEA  VMTSEVSSEV  SPVTSTETQP  SSTAAETLAS  PQAVQATKEE  EKNLVANGEF120
ASTTAASGNW  ADPAATNWET  WIPANVKKEN  GQVRIDEGRL  HISSTASYRV  AVHQTVDVDP180
NKRYLFSYNV  ETKDLKGSGV  RVRLRSLTAE  GKDLSPQEFA  YTPYKNGSQA  EHIEQILTVS240
PETRKLKVEL  FFENSVGQAW  LDNISLVEYV  EKTPETPEPS  LELVQPETGQ  ISLASNKVYL300
PVRPDLTYRI  ADAAVAIVEK  NMIRPLAAGK  TQVDVYDKDT  KLSSFELTVT  EHQATVFDTL360
RNNWEDISLA  NKRYQSNDTQ  MKAFLGRLDA  GVASSLKKWV  EPTNQGKTIF  NDIDFSKSSH420
LTTVYRRLEQ  MAQVVENPDS  AYYHDRSLID  LVRRGMNWLY  TNVYNENKSI  DGNWWDYEIG480
TPRAVVNTLI  YMHPYFSQEE  ILTYTKPISK  FVPDPTTISV  KH522

Predicted 3D structure by AlphaFold2 with pLDDT = 78.79 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM70(113-271)

MGFFISQSKQ  HYGIRKYKVG  VCSALIALSI  LGTRVAANQL  PSTETASPQS  SQLVETTPET60
TEAVNLTTEA  VMTSEVSSEV  SPVTSTETQP  SSTAAETLAS  PQAVQATKEE  EKNLVANGEF120
ASTTAASGNW  ADPAATNWET  WIPANVKKEN  GQVRIDEGRL  HISSTASYRV  AVHQTVDVDP180
NKRYLFSYNV  ETKDLKGSGV  RVRLRSLTAE  GKDLSPQEFA  YTPYKNGSQA  EHIEQILTVS240
PETRKLKVEL  FFENSVGQAW  LDNISLVEYV  EKTPETPEPS  LELVQPETGQ  ISLASNKVYL300
PVRPDLTYRI  ADAAVAIVEK  NMIRPLAAGK  TQVDVYDKDT  KLSSFELTVT  EHQATVFDTL360
RNNWEDISLA  NKRYQSNDTQ  MKAFLGRLDA  GVASSLKKWV  EPTNQGKTIF  NDIDFSKSSH420
LTTVYRRLEQ  MAQVVENPDS  AYYHDRSLID  LVRRGMNWLY  TNVYNENKSI  DGNWWDYEIG480
TPRAVVNTLI  YMHPYFSQEE  ILTYTKPISK  FVPDPTTISV  KH522

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help