Information for CAZyme ID: ADE16154.1
Basic Information
| GenBank ID | ADE16154.1 |
| Family | GH13_26 |
| Sequence Length | 970 |
| UniProt ID | D5BZE0(100,100) |
| Average pLDDT? | 94.14 |
| CAZy50 ID | 2484 |
| CAZy50 Rep | No, ABB74705.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 472759 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Chromatiaceae |
| Genus | Nitrosococcus |
| Species | Nitrosococcus halophilus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKIIPRATYR LQFNSHFTFA DAEAIVPYLH ELRVSHCYAS PYLKARSGSP HGYDIVDHNA | 60 |
| LNPEIGDRDT FVSWVQALHR QGMGQILDIV PNHMGVGGDD NAWWLDVLEQ GPASEYAAYF | 120 |
| DIDWRPIKEE LRGKVLLPLL GDHYGTVLEK GELRLTFDLE QGQFSIWFYN HRFPVDPSTY | 180 |
| PDILGHGLER LAEHLAEEEA PFLEYQSLIT AFEHLPSRYD TRVEKRVERL RDCVIYKRRL | 240 |
| AESCRKYPAI GAFVFDTVAA FNGVVEQPES FDLLHHLLER QAYRLAYWRV ASDEINYRRF | 300 |
| FDINDLAGLR MENPEVFETT HRFILELVKE GKVDGLRIDH PDGLYNPPSY YQRLNRQIAE | 360 |
| IRGEEEAADG NLKSSYYLVI EKILASYEHL PESWPVSGTT GYEFAYVNNG LFVYPGSQKE | 420 |
| FDQIYTRFIR HQWDFDELLY ERKKIIIRVQ LSSELTVLAN MLNSIAQADR HTRDFTLNGL | 480 |
| REALTEVVAC FPVYRTYADV DQVSEEDKRF IQWAVIQAKK RSPAADISIF DFIQAILLLE | 540 |
| ISTRSAFSQE IISFVMRFQQ YTGPTMAKAL EDTVLYIYNR LVSLNDVGSD PRNFGVSLTA | 600 |
| FHRANQERAQ RWPYGMVASS THDSKRSEDV RARLNVLSEM PGEWRKHLNR WARINRAKIR | 660 |
| RLNGFRAPSR NDEYLFYQTV LGTWPLFDMG EEELVEFRDR IEAYMLKAVK EAKVHTSWIN | 720 |
| PDTEYETAVV HFVRSVLGNL EKNPFLADFL PFQRRVAGLG LLNSLSQLLL KLTVPGVPDI | 780 |
| YQGNELWEFR LVDPDNRHSV DFALRQRMLQ ELMLLIKSSQ SLTPCVHKLL KNKEDGQVKL | 840 |
| YLTWKVLSFR AKLPLLFQKG DYLPLSVQGI KADHLCAFAR KHQGQVVVSI VPRWLALLGS | 900 |
| NEDELPLGES LWQKTWVEVP AVKEKENFTN VLTGEVVAVV QHNGKFYVPA GKLFESFSVA | 960 |
| LLAPSSLVAA | 970 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.14 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH13_26(26-407)
| 0 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.