CAZyme3D

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Entry ID

Information for CAZyme ID: ADC89010.1

Basic Information

GenBank IDADC89010.1
FamilyGH23
Sequence Length309
UniProt IDD3SPC3(100,100)Download
Average pLDDT?84.41
CAZy50 ID150857
CAZy50 RepNo, QID32909.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID638303
KingdomBacteria
PhylumAquificota
ClassAquificae
OrderAquificales
FamilyAquificaceae
GenusThermocrinis
SpeciesThermocrinis albus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLKGVLLFLT  ACFLTSCTPT  LRQTLYPDKD  NAVFLQRGQL  VFSEEEERFL  QEEARQFQIE60
VPDREEIRKY  IRYFLSNKRF  TQYALKRANY  YMPLIKPVLE  KHGLPPELAL  LPAIESGFNP120
FAVSRSGAAG  LWQFMPQTAR  RYGLRVDNLV  DERYDIQKST  EAAARYLKDL  YSFFKNWELA180
LAAYNCGEGC  VFSRTGGVDF  WQTKEFLPLE  TRNYVPAFMA  LLLLARFPEK  YGLDISVDSI240
SVVRKRVEED  TSVKDLITEA  QIQKSVFYDL  NPHIKTDKIP  AGAYVYLPAN  PEEERKVIRW300
DNGAKFIVR309

Predicted 3D structure by AlphaFold2 with pLDDT = 84.41 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH23(99-220)

MLKGVLLFLT  ACFLTSCTPT  LRQTLYPDKD  NAVFLQRGQL  VFSEEEERFL  QEEARQFQIE60
VPDREEIRKY  IRYFLSNKRF  TQYALKRANY  YMPLIKPVLE  KHGLPPELAL  LPAIESGFNP120
FAVSRSGAAG  LWQFMPQTAR  RYGLRVDNLV  DERYDIQKST  EAAARYLKDL  YSFFKNWELA180
LAAYNCGEGC  VFSRTGGVDF  WQTKEFLPLE  TRNYVPAFMA  LLLLARFPEK  YGLDISVDSI240
SVVRKRVEED  TSVKDLITEA  QIQKSVFYDL  NPHIKTDKIP  AGAYVYLPAN  PEEERKVIRW300
DNGAKFIVR309

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help