Information for CAZyme ID: ADC62436.1
Basic Information
GenBank ID | ADC62436.1 |
Family | GT35 |
Sequence Length | 837 |
UniProt ID | D3RTC7(100,100)![]() |
Average pLDDT? | 93.89 |
CAZy50 ID | 16113 |
CAZy50 Rep | No, QFY42352.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 572477 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Gammaproteobacteria |
Order | Chromatiales |
Family | Chromatiaceae |
Genus | Allochromatium |
Species | Allochromatium vinosum |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MSTPNPTESL DSERERTRTG LSKAALKQDF LDNLFYIQGR FREVATPHDL YMAAAFTTRD | 60 |
RLLKHWVESA QVFKTSHART VCYLSAEYLL GPHLACNLVN LGITEAAREA GEELGLDLDA | 120 |
ILEEEEEPGL GNGGLGRLAA CFMESLSTCR IPAIGYGIRY EFGIFDQAIE DGWQVEKTDN | 180 |
WLRNGNPWEI PRPKIRFSVG YGGYTESYRD DTGRSRVCWR PAQVINGMAY DTPILGYGTA | 240 |
NANLLRLWKA EAPTSFDFQA FNTGDYYGAV YANIQAETIS KVLYPNDEPE AGKELRLKQQ | 300 |
YFFVSCSMQD MIRLHLNTVG PLESFADKFV AQLNDTHPAL AVAELMRLLL DEHVMSWEQS | 360 |
WDITHRTFCY TNHTLLPEAL ETWSVSLFER LLPRHLEIVY EINRRFLDEV RMRFLGDEAR | 420 |
VWRMSLIAEG GERRIRMANL AVVGSRAVNG VAELHSELVK ATLFKDFAEL WPERFHNVTN | 480 |
GVTPRRFMVV ANPRLAQLIT KTCGHDDWIL DLERVRELEA HVDDAGLLED WRAVKRAAKQ | 540 |
DLATWMQQAA GVRLDPESLF DVQAKRFHEY KRQHLKVLHI IRCYQRIKQG QSQDLVPRAF | 600 |
IFGGKAAPGY FMAKLIIKLI NAVGEVVNND PQVNGWIRVA FMPDFNVKNG QRLYPAADLS | 660 |
EQISLAGKEA SGTGNMKFSM NGALTIGTLD GANVEIREAV GAENFFLFGM TAEEALQRQM | 720 |
SGYRPWEFYQ SDAELKSDID LINSGLFSHG DTQLFRPLTD NLVNHDPFMV LADYRAYLDC | 780 |
QKTVSETYRD TPRWTRMSIL NVARIGRFSS DRAIREYAEH IWKVTPKRIE PAHHSQS | 837 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.89 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT35(112-824)
MSTPNPTESL DSERERTRTG LSKAALKQDF LDNLFYIQGR FREVATPHDL YMAAAFTTRD | 60 |
RLLKHWVESA QVFKTSHART VCYLSAEYLL GPHLACNLVN LGITEAAREA GEELGLDLDA | 120 |
ILEEEEEPGL GNGGLGRLAA CFMESLSTCR IPAIGYGIRY EFGIFDQAIE DGWQVEKTDN | 180 |
WLRNGNPWEI PRPKIRFSVG YGGYTESYRD DTGRSRVCWR PAQVINGMAY DTPILGYGTA | 240 |
NANLLRLWKA EAPTSFDFQA FNTGDYYGAV YANIQAETIS KVLYPNDEPE AGKELRLKQQ | 300 |
YFFVSCSMQD MIRLHLNTVG PLESFADKFV AQLNDTHPAL AVAELMRLLL DEHVMSWEQS | 360 |
WDITHRTFCY TNHTLLPEAL ETWSVSLFER LLPRHLEIVY EINRRFLDEV RMRFLGDEAR | 420 |
VWRMSLIAEG GERRIRMANL AVVGSRAVNG VAELHSELVK ATLFKDFAEL WPERFHNVTN | 480 |
GVTPRRFMVV ANPRLAQLIT KTCGHDDWIL DLERVRELEA HVDDAGLLED WRAVKRAAKQ | 540 |
DLATWMQQAA GVRLDPESLF DVQAKRFHEY KRQHLKVLHI IRCYQRIKQG QSQDLVPRAF | 600 |
IFGGKAAPGY FMAKLIIKLI NAVGEVVNND PQVNGWIRVA FMPDFNVKNG QRLYPAADLS | 660 |
EQISLAGKEA SGTGNMKFSM NGALTIGTLD GANVEIREAV GAENFFLFGM TAEEALQRQM | 720 |
SGYRPWEFYQ SDAELKSDID LINSGLFSHG DTQLFRPLTD NLVNHDPFMV LADYRAYLDC | 780 |
QKTVSETYRD TPRWTRMSIL NVARIGRFSS DRAIREYAEH IWKVTPKRIE PAHHSQS | 837 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.