CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: ACZ79426.1

Basic Information

GenBank IDACZ79426.1
FamilyGH102
Sequence Length390
UniProt IDD2IBS0(100,100)Download
Average pLDDT?96.37
CAZy50 ID71019
CAZy50 RepNo, ADO30577.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID487
KingdomBacteria
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusNeisseria
SpeciesNeisseria meningitidis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

RPVGIPDPAG  TTVGGGGAVY  TVVPHLSLPH  WAAQDFAKSL  QSFRLGCANL  KNRQGWQDVC60
AQAFQTPVHS  FQAKQFFERY  FTPWQVAGNG  SLAGTVTGYY  EPVLKGDDRR  TAQARFPIYG120
IPDDFISVPL  PAGLRSGKAL  VRIRQTGKNS  GTIDNTGGTH  TADLSRFPIT  ARTTAIKGRF180
EGSRFLPYHT  RNQINGGALD  GKAPILGYAE  DPVELFFMHI  QGSGRLKTPS  GKYIRIGYAD240
KNEHPYVSIG  RYMADKGYLK  LGQTSMQGIK  SYMRQNPQRL  AEVLGQNPSY  IFFRELAGSS300
NDGPVGALGT  PLMGEYAGAV  DRHYITLGAP  LFVATAHPVT  RKALNRLIMA  QDTGSAIKGA360
VRVDYFWGYG  DEAGELAGKQ  KTTGYVWQLL  390

Predicted 3D structure by AlphaFold2 with pLDDT = 96.37 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH102(104-294)

RPVGIPDPAG  TTVGGGGAVY  TVVPHLSLPH  WAAQDFAKSL  QSFRLGCANL  KNRQGWQDVC60
AQAFQTPVHS  FQAKQFFERY  FTPWQVAGNG  SLAGTVTGYY  EPVLKGDDRR  TAQARFPIYG120
IPDDFISVPL  PAGLRSGKAL  VRIRQTGKNS  GTIDNTGGTH  TADLSRFPIT  ARTTAIKGRF180
EGSRFLPYHT  RNQINGGALD  GKAPILGYAE  DPVELFFMHI  QGSGRLKTPS  GKYIRIGYAD240
KNEHPYVSIG  RYMADKGYLK  LGQTSMQGIK  SYMRQNPQRL  AEVLGQNPSY  IFFRELAGSS300
NDGPVGALGT  PLMGEYAGAV  DRHYITLGAP  LFVATAHPVT  RKALNRLIMA  QDTGSAIKGA360
VRVDYFWGYG  DEAGELAGKQ  KTTGYVWQLL  390

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help