CAZyme3D

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Entry ID

Information for CAZyme ID: ACY56137.1

Basic Information

GenBank IDACY56137.1
FamilyCBM48, GH13_8
Sequence Length825
UniProt IDD0TZK1(100,100)Download
Average pLDDT?85.02
CAZy50 ID937
CAZy50 RepNo, CAG7908015.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID39946
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderPoales
FamilyPoaceae
GenusOryza
SpeciesOryza sativa

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MAAPASAVPG  SAAGLRAGAV  RFPVPAGARS  WRAAAELPTS  RSLLSGRRFP  GAVRVGGSGG60
RVAVRAAGAS  GEVMIPEGES  DGMPVSAGSD  DLQLPALDDE  LSTEVGAEVE  IESSGASDVE120
GVKRVVEELA  AEQKPRVVPP  TGDGQKIFQM  DSMLNGYKYH  LEYRYSLYRR  LRSDIDQYEG180
GLETFSRGYE  KFGFNHSAEG  VTYREWAPGA  HSAALVGDFN  NWNPNADRMS  KNEFGVWEIF240
LPNNADGSSP  IPHGSRVKVR  METPSGIKDS  IPAWIKYSVQ  AAGEIPYNGI  YYDPPEEEKY300
IFKHPQPKRP  KSLRIYETHV  GMSSTEPKIN  TYANFRDEVL  PRIKKLGYNA  VQIMAIQEHA360
YYGSFGYHVT  NFFAPSSRFG  TPEDLKSLID  KAHELGLVVL  MDVVHSHASN  NTLDGLNGFD420
GTDTHYFHSG  SRGHHWMWDS  RLFNYGNWEV  LRFLLSNARW  WLEEYKFDGF  RFDGVTSMMY480
THHGLQVAFT  GNYSEYFGFA  TDADAVVYLM  LVNDLIHGLY  PEAITIGEDV  SGMPTFALPV540
QDGGVGFDYR  LHMAVPDKWI  ELLKQSDESW  KMGDIVHTLT  NRRWSEKCVT  YAESHDQALV600
GDKTIAFWLM  DKDMYDFMAL  DRPATPSIDR  GIALHKMIRL  ITMGLGGEGY  LNFMGNEFGH660
PEWIDFPRAP  QVLPNGKFIP  GNNNSYDKCR  RRFDLGDADY  LRYRGMLEFD  RAMQSLEEKY720
GFMTSDHQYI  SRKHEEDKMI  IFEKGDLVFV  FNFHWSNSYF  DYRVGCLKPG  KYKVVLDSDA780
GLFGGFGRIH  HTAEHFTADC  SHDNRPYSFS  VYSPSRTCVV  YAPAE825

Predicted 3D structure by AlphaFold2 with pLDDT = 85.02 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM48(191-266)+GH13_8(364-656)

MAAPASAVPG  SAAGLRAGAV  RFPVPAGARS  WRAAAELPTS  RSLLSGRRFP  GAVRVGGSGG60
RVAVRAAGAS  GEVMIPEGES  DGMPVSAGSD  DLQLPALDDE  LSTEVGAEVE  IESSGASDVE120
GVKRVVEELA  AEQKPRVVPP  TGDGQKIFQM  DSMLNGYKYH  LEYRYSLYRR  LRSDIDQYEG180
GLETFSRGYE  KFGFNHSAEG  VTYREWAPGA  HSAALVGDFN  NWNPNADRMS  KNEFGVWEIF240
LPNNADGSSP  IPHGSRVKVR  METPSGIKDS  IPAWIKYSVQ  AAGEIPYNGI  YYDPPEEEKY300
IFKHPQPKRP  KSLRIYETHV  GMSSTEPKIN  TYANFRDEVL  PRIKKLGYNA  VQIMAIQEHA360
YYGSFGYHVT  NFFAPSSRFG  TPEDLKSLID  KAHELGLVVL  MDVVHSHASN  NTLDGLNGFD420
GTDTHYFHSG  SRGHHWMWDS  RLFNYGNWEV  LRFLLSNARW  WLEEYKFDGF  RFDGVTSMMY480
THHGLQVAFT  GNYSEYFGFA  TDADAVVYLM  LVNDLIHGLY  PEAITIGEDV  SGMPTFALPV540
QDGGVGFDYR  LHMAVPDKWI  ELLKQSDESW  KMGDIVHTLT  NRRWSEKCVT  YAESHDQALV600
GDKTIAFWLM  DKDMYDFMAL  DRPATPSIDR  GIALHKMIRL  ITMGLGGEGY  LNFMGNEFGH660
PEWIDFPRAP  QVLPNGKFIP  GNNNSYDKCR  RRFDLGDADY  LRYRGMLEFD  RAMQSLEEKY720
GFMTSDHQYI  SRKHEEDKMI  IFEKGDLVFV  FNFHWSNSYF  DYRVGCLKPG  KYKVVLDSDA780
GLFGGFGRIH  HTAEHFTADC  SHDNRPYSFS  VYSPSRTCVV  YAPAE825

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help