CAZyme3D

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Entry ID

Information for CAZyme ID: ACX67084.1

Basic Information

GenBank IDACX67084.1
FamilyGT108
Sequence Length313
UniProt IDD3ECG0(100,100)Download
Average pLDDT?97.00
CAZy50 ID146676
CAZy50 RepNo, ACT02824.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID481743
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. Y412MC10

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MNLLELRQQF  DANKRIYESA  KLVFRGVEGF  DVYNPTIPFQ  WNGKRYIYGR  VEKRHEWARS60
WVRLFEQSGP  DEWTAVPNTM  IYQLEDPYIS  VIDKQLVLGG  THVRYKQGRL  DTFYGYFYKG120
SDLHDLFYFT  TGPEYMKDIR  LVELRDGRIG  VFSRPRGEGI  RKEFGSESLV  GFTTIDSLDD180
LSPEVIENAP  YIRGLFSKDE  WGGCNQAYLL  ESGKIGVIGH  ICYAQGDTST  YMNMAFVLDP240
RTNQFSDLKI  IGTRPCYPDG  PAKKAHLTDC  AFTAGIEMRP  DGKVNLYSGI  GDTEAARIVI300
DYPFEKEGAI  VTL313

Predicted 3D structure by AlphaFold2 with pLDDT = 97.00 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT108(13-305)

MNLLELRQQF  DANKRIYESA  KLVFRGVEGF  DVYNPTIPFQ  WNGKRYIYGR  VEKRHEWARS60
WVRLFEQSGP  DEWTAVPNTM  IYQLEDPYIS  VIDKQLVLGG  THVRYKQGRL  DTFYGYFYKG120
SDLHDLFYFT  TGPEYMKDIR  LVELRDGRIG  VFSRPRGEGI  RKEFGSESLV  GFTTIDSLDD180
LSPEVIENAP  YIRGLFSKDE  WGGCNQAYLL  ESGKIGVIGH  ICYAQGDTST  YMNMAFVLDP240
RTNQFSDLKI  IGTRPCYPDG  PAKKAHLTDC  AFTAGIEMRP  DGKVNLYSGI  GDTEAARIVI300
DYPFEKEGAI  VTL313

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help