Information for CAZyme ID: ACV09568.1
Basic Information
| GenBank ID | ACV09568.1 |
| Family | CBM25, GH13_32 |
| Sequence Length | 688 |
| UniProt ID | C7R010(100,100) |
| Average pLDDT? | 88.65 |
| CAZy50 ID | 8892 |
| CAZy50 Rep | No, QIK84188.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 471856 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Jonesiaceae |
| Genus | Jonesia |
| Species | Jonesia denitrificans |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MIRGHRMKKG ASAIIGLCAS ALMALTVALV PTTAAQAGPP QRNNSDVISN MFQWTWNSVA | 60 |
| RECTQVLGPQ GYGYVQVSPP QEHIQGSQWW TSYQPVSYRI ESKLGTRAEF KAMITACNNA | 120 |
| GVGVIADAVI NHMTGQTGGT GWAGTTFSLE NYPGPDGGYS PQDFNSCKRN IANYGDRYEV | 180 |
| QNCRLVALQD LATGNTYVRQ EIARYLDDLA SLGVAGFRID AAKHIPATDL EAIKAATTQA | 240 |
| KNLYWIHEVI GAPGEPVQPS EYLGSGDSHE FGYGRALKDA FDGDIASLQN INNRGFLPSN | 300 |
| RAGVFVDNHD TERNNETMTY QWGAKYKLGN IFMLSYPYGS PSTYSGYTFS NKDAGAPQNG | 360 |
| QGKVNDAECT SGAWTCAHRW PEIANMVGFH NTVNGTNLSN WQSPTRNVIA YNRGNKGFVA | 420 |
| LNNTNSATTR EFITTLPNGR YCNVVASNTC TQTFTVSGGK VSVTLPAYGA VALHTGALDG | 480 |
| VTPDPDPDPT PDPTPGEALT VYYSTDKNWS NYRIHYRVGT DSWTTAPGAA MAPACTGWVS | 540 |
| ATVPSNGSAV TAAFNNGSGT WDNNSGKDYT LTGSVAAVKG GAVTTHNPCS GGGGSATQVF | 600 |
| YSTTANWSTY NIHYKVDGGS WTSVPGDSMT AACNGWVTRT IASAGKNVTA AFNNGSGTWD | 660 |
| NNSGKDYTFS GDVIQIANGA VTAGNPCV | 688 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.65 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH13_32(71-337)+CBM25(499-571)+CBM25(597-670)
| MIRGHRMKKG ASAIIGLCAS ALMALTVALV PTTAAQAGPP QRNNSDVISN MFQWTWNSVA | 60 |
| RECTQVLGPQ GYGYVQVSPP QEHIQGSQWW TSYQPVSYRI ESKLGTRAEF KAMITACNNA | 120 |
| GVGVIADAVI NHMTGQTGGT GWAGTTFSLE NYPGPDGGYS PQDFNSCKRN IANYGDRYEV | 180 |
| QNCRLVALQD LATGNTYVRQ EIARYLDDLA SLGVAGFRID AAKHIPATDL EAIKAATTQA | 240 |
| KNLYWIHEVI GAPGEPVQPS EYLGSGDSHE FGYGRALKDA FDGDIASLQN INNRGFLPSN | 300 |
| RAGVFVDNHD TERNNETMTY QWGAKYKLGN IFMLSYPYGS PSTYSGYTFS NKDAGAPQNG | 360 |
| QGKVNDAECT SGAWTCAHRW PEIANMVGFH NTVNGTNLSN WQSPTRNVIA YNRGNKGFVA | 420 |
| LNNTNSATTR EFITTLPNGR YCNVVASNTC TQTFTVSGGK VSVTLPAYGA VALHTGALDG | 480 |
| VTPDPDPDPT PDPTPGEALT VYYSTDKNWS NYRIHYRVGT DSWTTAPGAA MAPACTGWVS | 540 |
| ATVPSNGSAV TAAFNNGSGT WDNNSGKDYT LTGSVAAVKG GAVTTHNPCS GGGGSATQVF | 600 |
| YSTTANWSTY NIHYKVDGGS WTSVPGDSMT AACNGWVTRT IASAGKNVTA AFNNGSGTWD | 660 |
| NNSGKDYTFS GDVIQIANGA VTAGNPCV | 688 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.