CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: ACU85218.1

Basic Information

GenBank IDACU85218.1
FamilyCBM48, GH13_10
Sequence Length591
UniProt IDC7MCB1(100,100)Download
Average pLDDT?95.10
CAZy50 ID41392
CAZy50 RepNo, UEJ83399.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID446465
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermabacteraceae
GenusBrachybacterium
SpeciesBrachybacterium faecium

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSISPTARAY  DRYRVWAPSA  REVTLRIDGG  EHAMRPDGDG  WFALPGVPAM  PGARYAFRLD60
DGELWLPDPR  SLSQPDGVHA  DSEVVDPLAL  RRRTSWRGRS  LRGRVLYELH  VGTFTPGPDG120
RGGTFDSAIE  RLDELVALGV  DAVELLPIAP  FPGDRGWGYD  GVGLYGTHAA  YGGPAGLARF180
VAAAHERDLA  VLLDVVHNHL  GPSGNYLSMF  GPYFTDRHHT  PWGSAINLDQ  PGSREVRDFL240
LGSARLWLVD  VGVDGLRLDA  VHELCDDSPR  HLLAELADAV  ADWEVETARP  LTLIAESDRN300
QPATVTPTSR  GGLGMDMQWA  DDVHHGVHAW  ITGEREGYYG  DFGSAEALAA  VLSRVFLHAG360
TWSSFRARVW  GAPVEPGSDD  YDAHSFVTFL  QDHDQVGNRA  AGDRIHHGLS  AGQHAAAIAL420
ILLGPGTPML  FQGEEWAAST  PFTYFTDHEA  ELGALVSAGR  VEEFAAMGWA  EQVPDPQLRE480
TFESSILRWQ  EREEAPHAAM  LAWYRTLIAL  RRAHPDLHDP  DLRTTSVEVL  AEGTVLLHRG540
ALAVLAHRGP  GATGAGPRAA  EVLASFGEVG  RREDGTVQLA  GPGAVVLRPA  G591

Predicted 3D structure by AlphaFold2 with pLDDT = 95.10 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM48(12-82)+GH13_10(122-437)

MSISPTARAY  DRYRVWAPSA  REVTLRIDGG  EHAMRPDGDG  WFALPGVPAM  PGARYAFRLD60
DGELWLPDPR  SLSQPDGVHA  DSEVVDPLAL  RRRTSWRGRS  LRGRVLYELH  VGTFTPGPDG120
RGGTFDSAIE  RLDELVALGV  DAVELLPIAP  FPGDRGWGYD  GVGLYGTHAA  YGGPAGLARF180
VAAAHERDLA  VLLDVVHNHL  GPSGNYLSMF  GPYFTDRHHT  PWGSAINLDQ  PGSREVRDFL240
LGSARLWLVD  VGVDGLRLDA  VHELCDDSPR  HLLAELADAV  ADWEVETARP  LTLIAESDRN300
QPATVTPTSR  GGLGMDMQWA  DDVHHGVHAW  ITGEREGYYG  DFGSAEALAA  VLSRVFLHAG360
TWSSFRARVW  GAPVEPGSDD  YDAHSFVTFL  QDHDQVGNRA  AGDRIHHGLS  AGQHAAAIAL420
ILLGPGTPML  FQGEEWAAST  PFTYFTDHEA  ELGALVSAGR  VEEFAAMGWA  EQVPDPQLRE480
TFESSILRWQ  EREEAPHAAM  LAWYRTLIAL  RRAHPDLHDP  DLRTTSVEVL  AEGTVLLHRG540
ALAVLAHRGP  GATGAGPRAA  EVLASFGEVG  RREDGTVQLA  GPGAVVLRPA  G591

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help