CAZyme3D

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Entry ID

Information for CAZyme ID: ACU47903.1

Basic Information

GenBank IDACU47903.1
FamilyGT51
Sequence Length819
UniProt IDC7LBL8(100,100)Download
Average pLDDT?89.39
CAZy50 ID15576
CAZy50 RepNo, WDI30871.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID568815
KingdomBacteria
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyBrucellaceae
GenusBrucella
SpeciesBrucella microti

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MVRLIGYFFG  IGTVLMLLVA  GGAALYIGSL  AKDLPDYEVL  AKYEPPVMTR  VHASDGSLMA60
EFARERRLYL  PIQAVPNRVK  AAVVSAEDKT  FYEHHGLDFG  GLARAVVTNL  KNIGSGRRPV120
GASTITQQVA  KNFLLSSKQT  YDRKIKEAIL  AMRIEQAYSK  DRILELYLNE  IFFGLGSYGI180
ASAALTYFDK  SVGELTIAES  AYLAALPKGP  NNYHPFRQPE  RAIERRNWVI  DRMAENGYIT240
TAEAEDAKKQ  PLGVTPRTAT  HYLFASEYFT  EEVRRQIIQK  YGVDALYEGG  LSVRTTLNPK300
LQLEARKSLQ  AALIRYDEAR  GWRGPLKNVE  LGGDWGTAFG  NMEPYSDVPE  WQLAVVLNVT360
PAGADIGLQP  QFDASGSRSK  ERKRAFIAAD  DMKWAMRIVN  IGGKRTSAKS  PEGVLKPGDI420
IYVSKTGDSR  YSLQQPPKLE  GALVAMDPHT  GRVLAMVGGF  SFGESEFNRA  TQAYRQPGSS480
FKPFVYAAAL  DNGYTPASVV  LDGPLEIDQG  GSLGIWAPKN  FSGKFAGPST  LRYGIEQSRN540
VMTVRLAQDM  GMKLVVEYAE  RFGIYDKMLP  VLSMVLGAGE  TTVLRMVTAY  SIIANGGQSI600
TPSMIDRIQD  RYGKTVFKHD  NRQCEGCNAQ  EWANQDEPTL  IDNRDQVLDP  MTAYQITSMM660
EGVVQRGTAQ  ILKSLDRPLA  GKTGTTNEEK  DAWFVGFTPD  LVVGVFMGYD  TPTPLGRGNT720
GGGLAAPVFK  SFMEQALAGT  PKVDFRVPEG  MTVIAIDRKT  GMRANPGDPN  VIMEAFKPGT780
GPSDSYSVIG  MDTFREGSPV  APQSPQATRA  INSGSGGLY819

Predicted 3D structure by AlphaFold2 with pLDDT = 89.39 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT51(55-233)

MVRLIGYFFG  IGTVLMLLVA  GGAALYIGSL  AKDLPDYEVL  AKYEPPVMTR  VHASDGSLMA60
EFARERRLYL  PIQAVPNRVK  AAVVSAEDKT  FYEHHGLDFG  GLARAVVTNL  KNIGSGRRPV120
GASTITQQVA  KNFLLSSKQT  YDRKIKEAIL  AMRIEQAYSK  DRILELYLNE  IFFGLGSYGI180
ASAALTYFDK  SVGELTIAES  AYLAALPKGP  NNYHPFRQPE  RAIERRNWVI  DRMAENGYIT240
TAEAEDAKKQ  PLGVTPRTAT  HYLFASEYFT  EEVRRQIIQK  YGVDALYEGG  LSVRTTLNPK300
LQLEARKSLQ  AALIRYDEAR  GWRGPLKNVE  LGGDWGTAFG  NMEPYSDVPE  WQLAVVLNVT360
PAGADIGLQP  QFDASGSRSK  ERKRAFIAAD  DMKWAMRIVN  IGGKRTSAKS  PEGVLKPGDI420
IYVSKTGDSR  YSLQQPPKLE  GALVAMDPHT  GRVLAMVGGF  SFGESEFNRA  TQAYRQPGSS480
FKPFVYAAAL  DNGYTPASVV  LDGPLEIDQG  GSLGIWAPKN  FSGKFAGPST  LRYGIEQSRN540
VMTVRLAQDM  GMKLVVEYAE  RFGIYDKMLP  VLSMVLGAGE  TTVLRMVTAY  SIIANGGQSI600
TPSMIDRIQD  RYGKTVFKHD  NRQCEGCNAQ  EWANQDEPTL  IDNRDQVLDP  MTAYQITSMM660
EGVVQRGTAQ  ILKSLDRPLA  GKTGTTNEEK  DAWFVGFTPD  LVVGVFMGYD  TPTPLGRGNT720
GGGLAAPVFK  SFMEQALAGT  PKVDFRVPEG  MTVIAIDRKT  GMRANPGDPN  VIMEAFKPGT780
GPSDSYSVIG  MDTFREGSPV  APQSPQATRA  INSGSGGLY819

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help