CAZyme3D

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Entry ID

Information for CAZyme ID: ACU38506.1

Basic Information

GenBank IDACU38506.1
FamilyCE2
Sequence Length334
UniProt IDC6WMZ3(100,100)Download
Average pLDDT?92.67
CAZy50 ID37698
CAZy50 RepNo, ADI05786.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID446462
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusActinosynnema
SpeciesActinosynnema mirum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MGARLITAAL  AALLATGLAT  PVAAAATGDG  SPTDSNVKYF  GRWNTADQTA  YVSEWAGAYV60
LIGFTGTTVK  LKQRNAIDLY  ASVDGGPDVL  HANVSGTVDL  TPTPLKAGNH  TVRVSYRPIA120
GSYKGDAVFR  GVALDSGART  YAPTAPARTV  EFIGDSITVG  QLSSKQALTG  YAWLTGERLG180
AAHTQIAVGG  ACLYPAADGC  IGMSDRWLRT  GLAATAPLWD  FTRYRADAVV  VNLGTNDVGH240
GVTGAQFQAG  YTTLLRRVRE  KYPNALVLAL  RVFRNRYVAE  TQAAVAAVGD  ARVRFVDTTG300
WIVESTDTVD  NVHPNDAGHR  KVADRLTPLI  SGSW334

Predicted 3D structure by AlphaFold2 with pLDDT = 92.67 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE2(150-330)

MGARLITAAL  AALLATGLAT  PVAAAATGDG  SPTDSNVKYF  GRWNTADQTA  YVSEWAGAYV60
LIGFTGTTVK  LKQRNAIDLY  ASVDGGPDVL  HANVSGTVDL  TPTPLKAGNH  TVRVSYRPIA120
GSYKGDAVFR  GVALDSGART  YAPTAPARTV  EFIGDSITVG  QLSSKQALTG  YAWLTGERLG180
AAHTQIAVGG  ACLYPAADGC  IGMSDRWLRT  GLAATAPLWD  FTRYRADAVV  VNLGTNDVGH240
GVTGAQFQAG  YTTLLRRVRE  KYPNALVLAL  RVFRNRYVAE  TQAAVAAVGD  ARVRFVDTTG300
WIVESTDTVD  NVHPNDAGHR  KVADRLTPLI  SGSW334

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help