CAZyme3D

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Entry ID

Information for CAZyme ID: ACU35778.1

Basic Information

GenBank IDACU35778.1
FamilyCBM2, GH5_8
Sequence Length543
UniProt IDC6WE35(100,100)Download
Average pLDDT?91.14
CAZy50 ID31500
CAZy50 RepNo, ANN17163.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID446462
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusActinosynnema
SpeciesActinosynnema mirum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRTRIALAAA  AALLLSAFTA  PPPAPAEAAA  PSAAAAGFTI  SGGRLLDANG  NDFVLRGVNH60
AHTWYPTRTR  QALADVKALG  ANSVRVVLAS  GDRWTRNDAA  DVADVIAQCK  ANRLICVLEV120
HDTTGYGEQS  GAIPLSKAVD  YWVGVKSALV  GQEKYAILNI  GNEPYGNTGY  AAWTADTRSA180
LTRLRAEGFT  HTIMVDAPNW  GQDWAFTMRD  NAASVFAADP  QRNTIFSIHM  YGVFDTAAEV240
DDYLGRFVAA  GLPIAVGEFG  DMHSDGDPNE  DAIFAAAQRL  RLGYLAWSWS  GNGGGVEYLD300
LAVDFNAAQL  SAWGQRTFNG  ANGIKATSRE  ASVFGGGDDT  RAPTAPGTPT  ASSVTSSGAV360
LGWSASTDNV  GVTGYDVVRV  SGSTETALAS  TATTSATLTG  LTAATAHTLA  VYARDAAGNR420
STRSGTVVVT  TLPGSPVGPC  AVTYRVTGQW  TGGFQGEVKI  ANTGTAAVKG  WVLRWTWPGA480
QTVSSMWGGT  PTQSGANLSV  ANASYTADIP  AGGSVSVGFT  GGVTGANAAP  TAFTLNGASC540
ATA543

Predicted 3D structure by AlphaFold2 with pLDDT = 91.14 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH5_8(47-296)+CBM2(440-540)

MRTRIALAAA  AALLLSAFTA  PPPAPAEAAA  PSAAAAGFTI  SGGRLLDANG  NDFVLRGVNH60
AHTWYPTRTR  QALADVKALG  ANSVRVVLAS  GDRWTRNDAA  DVADVIAQCK  ANRLICVLEV120
HDTTGYGEQS  GAIPLSKAVD  YWVGVKSALV  GQEKYAILNI  GNEPYGNTGY  AAWTADTRSA180
LTRLRAEGFT  HTIMVDAPNW  GQDWAFTMRD  NAASVFAADP  QRNTIFSIHM  YGVFDTAAEV240
DDYLGRFVAA  GLPIAVGEFG  DMHSDGDPNE  DAIFAAAQRL  RLGYLAWSWS  GNGGGVEYLD300
LAVDFNAAQL  SAWGQRTFNG  ANGIKATSRE  ASVFGGGDDT  RAPTAPGTPT  ASSVTSSGAV360
LGWSASTDNV  GVTGYDVVRV  SGSTETALAS  TATTSATLTG  LTAATAHTLA  VYARDAAGNR420
STRSGTVVVT  TLPGSPVGPC  AVTYRVTGQW  TGGFQGEVKI  ANTGTAAVKG  WVLRWTWPGA480
QTVSSMWGGT  PTQSGANLSV  ANASYTADIP  AGGSVSVGFT  GGVTGANAAP  TAFTLNGASC540
ATA543

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help