CAZyme3D

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Entry ID

Information for CAZyme ID: ACR76185.1

Basic Information

GenBank IDACR76185.1
FamilyGH51
Sequence Length520
UniProt IDC4ZF64(100,100)Download
Average pLDDT?95.02
CAZy50 ID63937
CAZy50 RepNo, CBK91636.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID515619
KingdomBacteria
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MAGQDKCIRD  KGETMAKIIV  NNENKKSTIA  PEIYGHFSEH  LGRCIYEGLF  VGENSDIPNV60
NGMRTDVVDA  LKEMKIPVLR  WPGGCFADEY  HWMDGIGPKE  KRKKMINTHW  GGVVEDNSFG120
THEFFELCRQ  LGCKTYVNGN  LGSGTVREMS  EWVEYITFNG  VSPMADLRKE  NGHEEPWTID180
YFGVGNENWG  CGGNMRPEHY  ADEYRRYQTY  VRNYAGNQPI  NKICCGPNVD  DYEWTKKVMA240
TCFDHCDPKL  HGLMDGLSLH  YYTLPETEDD  WNIKGSATDF  TEDIFYQTLK  RGYFMEELIN300
RHGAIMDEYD  PDKNIGLIVD  EWGIWSDVEP  GTNPGFLYQQ  NTMRDALVAG  MTLNIFNKHS360
DRVKMACIAQ  LINVLQSVML  TDGDKMIKTP  TYYVFHMMRH  HQGAALLDSS  LVGGATVGSG420
KNELPKVFES  VSEDKDGVIT  VTLTNNSLES  SEDVDIMLTN  EGDKYSVSEA  RYIEGAMDAH480
NTFEAPEVVD  EKDFTAYENT  QTGVKVTLPA  CSVVTLRLSK  520

Predicted 3D structure by AlphaFold2 with pLDDT = 95.02 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH51(16-519)

MAGQDKCIRD  KGETMAKIIV  NNENKKSTIA  PEIYGHFSEH  LGRCIYEGLF  VGENSDIPNV60
NGMRTDVVDA  LKEMKIPVLR  WPGGCFADEY  HWMDGIGPKE  KRKKMINTHW  GGVVEDNSFG120
THEFFELCRQ  LGCKTYVNGN  LGSGTVREMS  EWVEYITFNG  VSPMADLRKE  NGHEEPWTID180
YFGVGNENWG  CGGNMRPEHY  ADEYRRYQTY  VRNYAGNQPI  NKICCGPNVD  DYEWTKKVMA240
TCFDHCDPKL  HGLMDGLSLH  YYTLPETEDD  WNIKGSATDF  TEDIFYQTLK  RGYFMEELIN300
RHGAIMDEYD  PDKNIGLIVD  EWGIWSDVEP  GTNPGFLYQQ  NTMRDALVAG  MTLNIFNKHS360
DRVKMACIAQ  LINVLQSVML  TDGDKMIKTP  TYYVFHMMRH  HQGAALLDSS  LVGGATVGSG420
KNELPKVFES  VSEDKDGVIT  VTLTNNSLES  SEDVDIMLTN  EGDKYSVSEA  RYIEGAMDAH480
NTFEAPEVVD  EKDFTAYENT  QTGVKVTLPA  CSVVTLRLSK  520

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help