CAZyme3D

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Entry ID

Information for CAZyme ID: ACP47350.1

Basic Information

GenBank IDACP47350.1
FamilyGT4
Sequence Length465
UniProt IDC3NJU8(100,100)Download
Average pLDDT?89.77
CAZy50 ID75912
CAZy50 RepNo, ABP95745.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID419942
KingdomArchaea
PhylumThermoproteota
ClassThermoprotei
OrderSulfolobales
FamilySulfolobaceae
GenusSulfolobus
SpeciesSulfolobus islandicus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MNTIDINLYI  DLPLFQDKHK  WINMERNSMF  SVAINTQTPP  IRFTLTYRDL  LEKYGYLEPP60
IDLGLLSNED  YHTSVGGVAK  MMLSLINANA  FSKSRWVSLG  PGYPPSVKMT  STEVHFVDLE120
AKSLANYTRF  KEGLYNEAHG  LGKYELVGEE  YIAYANYNWL  SAQKLLEFYK  DTDIYFINDF180
QQLLVGGIIG  PSAPAVLWYH  IPFVPENLSK  KLREFLIKAF  ESFDLVILST  KRDLEGLIRT240
GAKVKVKQIY  PFIDPSDYKT  VGKKEIQYVE  DKYGFKGDDK  VVLVVARMDP  MKSQDLAISA300
IKNVDAKLVL  AGDGSFTSRT  LGHDKGSMWV  SRLKELARSL  GVQNKVVFTG  YVPDDELFAL360
YQRANVVLLP  SRIEGFGLAV  CEGWVYGKPA  VVSSGTGVSE  LIIEGGNGFV  FKSGNVEELA420
EKLKLALKDE  KVGSLGRETV  KRCSVNNAVN  ELREAFDLAS  EEYKK465

Predicted 3D structure by AlphaFold2 with pLDDT = 89.77 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT4(273-432)

MNTIDINLYI  DLPLFQDKHK  WINMERNSMF  SVAINTQTPP  IRFTLTYRDL  LEKYGYLEPP60
IDLGLLSNED  YHTSVGGVAK  MMLSLINANA  FSKSRWVSLG  PGYPPSVKMT  STEVHFVDLE120
AKSLANYTRF  KEGLYNEAHG  LGKYELVGEE  YIAYANYNWL  SAQKLLEFYK  DTDIYFINDF180
QQLLVGGIIG  PSAPAVLWYH  IPFVPENLSK  KLREFLIKAF  ESFDLVILST  KRDLEGLIRT240
GAKVKVKQIY  PFIDPSDYKT  VGKKEIQYVE  DKYGFKGDDK  VVLVVARMDP  MKSQDLAISA300
IKNVDAKLVL  AGDGSFTSRT  LGHDKGSMWV  SRLKELARSL  GVQNKVVFTG  YVPDDELFAL360
YQRANVVLLP  SRIEGFGLAV  CEGWVYGKPA  VVSSGTGVSE  LIIEGGNGFV  FKSGNVEELA420
EKLKLALKDE  KVGSLGRETV  KRCSVNNAVN  ELREAFDLAS  EEYKK465

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help