CAZyme3D

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Entry ID

Information for CAZyme ID: ACO17645.1

Basic Information

GenBank IDACO17645.1
FamilyCBM40, GH33
Sequence Length947
UniProt IDC1C8T0(100,100)Download
Average pLDDT?83.45
CAZy50 ID1771
CAZy50 RepNo, CBJ21850.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID488221
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus pneumoniae

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MIVGAVVFGT  SPVLAQEGAS  EQPLANETQL  SGESSTLTDT  EKSQPSSETE  LSGNKQEQER60
KDKQEEKIPR  DYYARDLENV  ETVIEKEDVE  TNASNGQRVD  LSSELDKLKK  LENATVHMEF120
KPDASAPRFY  NLFSVSSDTK  ENEYFTMSVL  DNTALIEGRG  ANGEQFYDKY  TDAPLKVRPG180
QWNSVTFTVE  QPTAELPHGR  VRLYVNGVLS  RTSLKSGNFI  KDMPDVNQAQ  LGATKRGNKT240
VWGSNLQVRN  LTVYDRALSP  EEVQTRSQLF  ERGDLEKKLP  EGAKISEKED  VFEGGMNNKP300
NKDGIKSYRI  PALLKTDKGT  LIAGADERRL  HSSDWGDIGM  VIRRSEDNGK  TWGDRVTITN360
LRDNPKASDP  SIGSPVNIDM  VLVQDPETKR  IFSIYDMFPE  GKGIFGMSSQ  KEEAYKKIDG420
KTYQILYREG  EKGAYTIREN  GTVYTPDGKA  TDYRVVVDPV  KPAYSDKGDL  YKGDQLLGNI480
YFTTNKTSPF  RIAKDSYLWM  SYSDDDGKTW  SAPQDITPMV  KADWMKFLGV  GPGTGIVLRN540
GPHKGRILIP  VYTTNNVSHL  NGSQSSRVIY  SDDHGKTWHA  GEAVNDNRQV  DGQKIHSSTM600
NNRRAQNTES  TVVQLNNGDV  KLFMRGLTGD  LQVATSKDGG  VTWEKDIKRY  PQVKDVYVQM660
SAIHTMHNGK  EYIILSNAGG  PKRENGMVHL  ARVEENGELT  WLKHNPIQKG  EFAYNSLQEL720
GNGEYGILYE  HTEKGQNAYT  LSFRKFNWEF  LSKNLISPTE  AKVKRTREMG  KGEMGKGVIG780
LEFDSEVLVN  KAPTLQLANG  KTATFLTQYD  SKTLLFAVDK  EDIGQEIIGI  AKGSIESMHN840
LPVNLAGARV  PGGVNGSKAA  VHEVPEFTGG  VNGTEPAVHE  IAEYKGSDSL  VTLTTKEDYT900
YKAPLAQQAL  PETGNKESDL  LASLGLTAFF  LGLFTLGKKE  RTIREEF947

Predicted 3D structure by AlphaFold2 with pLDDT = 83.45 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM40(86-269)+GH33(296-746)

MIVGAVVFGT  SPVLAQEGAS  EQPLANETQL  SGESSTLTDT  EKSQPSSETE  LSGNKQEQER60
KDKQEEKIPR  DYYARDLENV  ETVIEKEDVE  TNASNGQRVD  LSSELDKLKK  LENATVHMEF120
KPDASAPRFY  NLFSVSSDTK  ENEYFTMSVL  DNTALIEGRG  ANGEQFYDKY  TDAPLKVRPG180
QWNSVTFTVE  QPTAELPHGR  VRLYVNGVLS  RTSLKSGNFI  KDMPDVNQAQ  LGATKRGNKT240
VWGSNLQVRN  LTVYDRALSP  EEVQTRSQLF  ERGDLEKKLP  EGAKISEKED  VFEGGMNNKP300
NKDGIKSYRI  PALLKTDKGT  LIAGADERRL  HSSDWGDIGM  VIRRSEDNGK  TWGDRVTITN360
LRDNPKASDP  SIGSPVNIDM  VLVQDPETKR  IFSIYDMFPE  GKGIFGMSSQ  KEEAYKKIDG420
KTYQILYREG  EKGAYTIREN  GTVYTPDGKA  TDYRVVVDPV  KPAYSDKGDL  YKGDQLLGNI480
YFTTNKTSPF  RIAKDSYLWM  SYSDDDGKTW  SAPQDITPMV  KADWMKFLGV  GPGTGIVLRN540
GPHKGRILIP  VYTTNNVSHL  NGSQSSRVIY  SDDHGKTWHA  GEAVNDNRQV  DGQKIHSSTM600
NNRRAQNTES  TVVQLNNGDV  KLFMRGLTGD  LQVATSKDGG  VTWEKDIKRY  PQVKDVYVQM660
SAIHTMHNGK  EYIILSNAGG  PKRENGMVHL  ARVEENGELT  WLKHNPIQKG  EFAYNSLQEL720
GNGEYGILYE  HTEKGQNAYT  LSFRKFNWEF  LSKNLISPTE  AKVKRTREMG  KGEMGKGVIG780
LEFDSEVLVN  KAPTLQLANG  KTATFLTQYD  SKTLLFAVDK  EDIGQEIIGI  AKGSIESMHN840
LPVNLAGARV  PGGVNGSKAA  VHEVPEFTGG  VNGTEPAVHE  IAEYKGSDSL  VTLTTKEDYT900
YKAPLAQQAL  PETGNKESDL  LASLGLTAFF  LGLFTLGKKE  RTIREEF947

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help