CAZyme3D

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Entry ID

Information for CAZyme ID: ACN27867.1

Basic Information

GenBank IDACN27867.1
FamilyGT77
Sequence Length615
UniProt IDB6SWU4(100,100)Download
Average pLDDT?88.02
CAZy50 ID3162
CAZy50 RepNo, QHO40204.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID4577
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderPoales
FamilyPoaceae
GenusZea
SpeciesZea mays

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MAAWCSAEST  KPVFVGIYGA  VLGGFAVSAL  FFLLSSFSSL  SAPTLPLPAA  AIAGANLSAP60
TLAQAETMYN  RPIWKPPPRR  ARMPSPRAFR  LTRDMVAARA  RDGVIVVTFG  NYAFLDFILT120
WVRHLTDLGV  DNLLVGAMDT  KLLRELYFRG  VPVFDMGSRM  VTEDAGWGSP  TFHKMGREKV180
LLINALLPFG  YELLMCDTDM  VWLKNPLPYL  ARYPDADLLT  SSDQVIPTVT  DDSLENWREV240
TGAFNIGIFH  WRPTEPAKRL  AKDWKDLVIS  DDKLWDQNAF  NDLVRKKFGQ  PVQGDDLVYS300
YDGKLKLGVL  PASIFCSGHT  YFVQGMYKQL  HLEPYAVHTT  FQYAGTEGKR  HRLREAMLFF360
DQPSYYDSPG  GFLSFKPNIP  KSLLLDGAHT  VESHFELVNY  QLKQIRTALA  VASLLKRTLV420
MPPLWCRLDR  MWFGHPGILE  GTMTRQPFLC  PLDHVFEVHV  MLKDLPKEEF  GQHIDFREYS480
FLENPSLPKE  VKDSLLEVEL  CDEHSSRCSA  IDEIDKHGTF  LLPRNSTEEK  LLDLLSSYKD540
VKIIQFSSMV  DAFGGFADAA  VEKKFRNRVN  RYVGLWCCVE  FREIGHIYYD  MYWDEKPGWK600
PHPPETREQD  HPPWS615

Predicted 3D structure by AlphaFold2 with pLDDT = 88.02 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT77(130-353)

MAAWCSAEST  KPVFVGIYGA  VLGGFAVSAL  FFLLSSFSSL  SAPTLPLPAA  AIAGANLSAP60
TLAQAETMYN  RPIWKPPPRR  ARMPSPRAFR  LTRDMVAARA  RDGVIVVTFG  NYAFLDFILT120
WVRHLTDLGV  DNLLVGAMDT  KLLRELYFRG  VPVFDMGSRM  VTEDAGWGSP  TFHKMGREKV180
LLINALLPFG  YELLMCDTDM  VWLKNPLPYL  ARYPDADLLT  SSDQVIPTVT  DDSLENWREV240
TGAFNIGIFH  WRPTEPAKRL  AKDWKDLVIS  DDKLWDQNAF  NDLVRKKFGQ  PVQGDDLVYS300
YDGKLKLGVL  PASIFCSGHT  YFVQGMYKQL  HLEPYAVHTT  FQYAGTEGKR  HRLREAMLFF360
DQPSYYDSPG  GFLSFKPNIP  KSLLLDGAHT  VESHFELVNY  QLKQIRTALA  VASLLKRTLV420
MPPLWCRLDR  MWFGHPGILE  GTMTRQPFLC  PLDHVFEVHV  MLKDLPKEEF  GQHIDFREYS480
FLENPSLPKE  VKDSLLEVEL  CDEHSSRCSA  IDEIDKHGTF  LLPRNSTEEK  LLDLLSSYKD540
VKIIQFSSMV  DAFGGFADAA  VEKKFRNRVN  RYVGLWCCVE  FREIGHIYYD  MYWDEKPGWK600
PHPPETREQD  HPPWS615

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help