Information for CAZyme ID: ACM29744.1
Basic Information
| GenBank ID | ACM29744.1 |
| Family | GH94 |
| Sequence Length | 1086 |
| UniProt ID | B9JIK2(100,100) |
| Average pLDDT? | 95.00 |
| CAZy50 ID | 10416 |
| CAZy50 Rep | No, QEN88792.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 311403 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium rhizogenes |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MPSESQRSFQ TPRREELGLS TLTNSAGLSA SALPNGTLFA IDFADQQGGV MINQVLGSPV | 60 |
| YGGIGRLYLR IGGSKPEVVE IVGPKAVVSF GHDETSFGWS GETAGVRHTV QLQLHPGDTA | 120 |
| WFWRVSLENT TNKPISADLV LIQDVGIGDR GFLMNSEAYA SQYIDHHIAA HPAFGPVVMN | 180 |
| RQNLKQGGGR NPWLAQGCLD GAAAYATDSI QLMVPASSGD APMVPGFGEN LASTRRQHEV | 240 |
| ACPAIQSKPL TLAPKATATT TFFGLFVADH PLASSDADLV RLDALPQALG QLTATDIASE | 300 |
| TPVRSLVQDA PLFVTEPLDD ATIDRLYPER MLEERIDGQL YSFFVPEGSL NRHIVLREKE | 360 |
| RLVARRHGAI VRSGQNMLLD DQTLGATCWM QGIFAAQLTI GNTSFHKLFS ISRDPYNLTR | 420 |
| ASGLRILVDL GEGWRLLGVP AAFDMGLSDV RWIYKFAGRT ITVTAATSGD DPAMQWNVTV | 480 |
| EGKACRFLVF GHIVLGERDY EAVANIEIDA AAKQISFRPQ SSWLWDRYPQ AAYHLVTATP | 540 |
| DAFEAIGGDE LLYGDGISRN GPFIALKSRS TQGFSFAVTG SMTDAAAGEA LAARYKAGVS | 600 |
| AEDMLAPAQG FWSHVTRGLR IKGSGPDIVE QAVMLPWLAH DAIIHLSVPH GLEQYTGAAW | 660 |
| GTRDVCQGPV EFLLAYEHDA EVKQVLSTVF SEQYRDRGDW PQWFMLEPYA NIRAGESHGD | 720 |
| IVVWPLKALC DYIEATGDIT FLAETVPWRA DDTMQRTEET ATISDHVEKL LDTVRSRFVP | 780 |
| GTSLIRYGEG DWNDSLQPAD PHLRDWMVSS WTVSLLYEQL VRYAAILTFA SRDEEAQSLK | 840 |
| ETAAAMRSDF NRLLMRDGIV AGYGVFDPSH DGVELLLHPA DTRTGLHYSL IAMTQPMLGG | 900 |
| LFTPEQRHDH MKLISENLLF PDGVRLMEKP ATYAGGPETL FRRAESSSFF GREIGLMYVH | 960 |
| AHLRYCEALA LDNDAEGVWS ALALANPISV SGRLDHASLR QRNTYFSSSD AAFDDRYHAS | 1020 |
| SDWAHVKAGD IAVDGGWRIY SSGPGLYTKS LINNVFGFKR HFGQRVHKPL LPASLTVSKV | 1080 |
| ELDFKA | 1086 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.00 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH94(112-1085)
| MPSESQRSFQ TPRREELGLS TLTNSAGLSA SALPNGTLFA IDFADQQGGV MINQVLGSPV | 60 |
| YGGIGRLYLR IGGSKPEVVE IVGPKAVVSF GHDETSFGWS GETAGVRHTV QLQLHPGDTA | 120 |
| WFWRVSLENT TNKPISADLV LIQDVGIGDR GFLMNSEAYA SQYIDHHIAA HPAFGPVVMN | 180 |
| RQNLKQGGGR NPWLAQGCLD GAAAYATDSI QLMVPASSGD APMVPGFGEN LASTRRQHEV | 240 |
| ACPAIQSKPL TLAPKATATT TFFGLFVADH PLASSDADLV RLDALPQALG QLTATDIASE | 300 |
| TPVRSLVQDA PLFVTEPLDD ATIDRLYPER MLEERIDGQL YSFFVPEGSL NRHIVLREKE | 360 |
| RLVARRHGAI VRSGQNMLLD DQTLGATCWM QGIFAAQLTI GNTSFHKLFS ISRDPYNLTR | 420 |
| ASGLRILVDL GEGWRLLGVP AAFDMGLSDV RWIYKFAGRT ITVTAATSGD DPAMQWNVTV | 480 |
| EGKACRFLVF GHIVLGERDY EAVANIEIDA AAKQISFRPQ SSWLWDRYPQ AAYHLVTATP | 540 |
| DAFEAIGGDE LLYGDGISRN GPFIALKSRS TQGFSFAVTG SMTDAAAGEA LAARYKAGVS | 600 |
| AEDMLAPAQG FWSHVTRGLR IKGSGPDIVE QAVMLPWLAH DAIIHLSVPH GLEQYTGAAW | 660 |
| GTRDVCQGPV EFLLAYEHDA EVKQVLSTVF SEQYRDRGDW PQWFMLEPYA NIRAGESHGD | 720 |
| IVVWPLKALC DYIEATGDIT FLAETVPWRA DDTMQRTEET ATISDHVEKL LDTVRSRFVP | 780 |
| GTSLIRYGEG DWNDSLQPAD PHLRDWMVSS WTVSLLYEQL VRYAAILTFA SRDEEAQSLK | 840 |
| ETAAAMRSDF NRLLMRDGIV AGYGVFDPSH DGVELLLHPA DTRTGLHYSL IAMTQPMLGG | 900 |
| LFTPEQRHDH MKLISENLLF PDGVRLMEKP ATYAGGPETL FRRAESSSFF GREIGLMYVH | 960 |
| AHLRYCEALA LDNDAEGVWS ALALANPISV SGRLDHASLR QRNTYFSSSD AAFDDRYHAS | 1020 |
| SDWAHVKAGD IAVDGGWRIY SSGPGLYTKS LINNVFGFKR HFGQRVHKPL LPASLTVSKV | 1080 |
| ELDFKA | 1086 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.