CAZyme3D

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Entry ID

Information for CAZyme ID: ACL76656.1

Basic Information

GenBank IDACL76656.1
FamilyCBM22, CBM9, GH10
Sequence Length1050
UniProt IDB8I5C0(100,100)Download
Average pLDDT?89.12
CAZy50 ID3306
CAZy50 RepNo, AEI43097.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID394503
KingdomBacteria
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminiclostridium
SpeciesRuminiclostridium cellulolyticum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MYRNRNKVLA  LLLAFAMIIS  VMPMSAVMAE  TKTTYHETFA  DGKGAATQSG  GATLEKVGNK60
VFEGNDDGAA  LYVSNRKNNW  DAADFKFNDI  GLKNGKTYSI  TVKGFVDSNA  KVPAGAQAFL120
QVVNSYAWLA  GSDFVAGKAF  TLSGKYTVDT  SKDDGIRVQS  NDEGKEVPFY  IGDISITEEA180
VEEVPEDPSR  PKAETFKTIT  FEDKTTGGFG  ARSGEGGEKL  TVTKEANHTD  GGSYALKVEN240
RTMTWHGPSM  NVEKFVSQGS  EYKVTAWVKL  ASPESSQLQL  STQVGNGGTA  SYVSLAAKTI300
STSDGWVKYE  GTYRYNNVSS  EYITIYVESA  SSANASFYID  DISFEQTGSG  PIKIQNDLES360
IKNVYKKDFL  IGNAIAAEDM  EGVRLDLLKK  HFNVMTAGNA  MKPDALQPTK  GNFTFADADK420
LVDKVLAEGF  EMHGHTLVWH  QQSPAWLNTK  VDASGNAVPL  SREEALTNLK  THIKTVVEHY480
GNKVISWDVV  NEGMNDNPSN  PEDWRGALRQ  SPWYQAIGPD  YMEQAFLAAR  EVLDAHPDWD540
VKLYYNDYND  DNQNKSKAIY  YMVKELNEKY  AKTHPGKLLI  DGVGMQAHYN  MSTNPSNVEL600
SLERFISLGV  EVSITELDVQ  AGSDFKLTDE  IANAQGYLYA  QLFDIYKKHA  ANISRITIWG660
LDDGTSWRSS  TNPLPFDKNL  QAKPAFFGTV  DPAKFMNEHQ  PQTPKNAKYT  TARYGTPVID720
GTVDSVWSKA  QDIPINQYQM  AWQGATGTAK  ALWDDKNLYV  LVQVSDSELD  KKSVNTYEQD780
SVEVFIDENN  GKTTFYQDDD  GQYRVNYDNE  TSFNPESIST  GFKSATKVSG  TSYTVEIKIP840
LKSVTPSNNL  KIGFDVQIND  AKDGSRKSVA  TWNDTTGNGY  QDTSVYGVLT  LSNSDSNNTS900
QYITRGEFID  SIIKALGLNK  NVQVKDSFKD  VTKDSSYYAS  VSVAYQKGIV  SGYKNGEFKP960
QAKITRQEAM  TIIAKAMKAA  GKNVNYSADE  INKILKEFKD  SNKVAGWAKG  SVAACIKAGI1020
VSGKSGKMLA  PQENITFSQT  ESIVKKLSAK  1050

Predicted 3D structure by AlphaFold2 with pLDDT = 89.12 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM22(35-154)+CBM22(197-329)+GH10(360-691)+CBM9(719-891)+SLH(928-969)+SLH(998-1036)

MYRNRNKVLA  LLLAFAMIIS  VMPMSAVMAE  TKTTYHETFA  DGKGAATQSG  GATLEKVGNK60
VFEGNDDGAA  LYVSNRKNNW  DAADFKFNDI  GLKNGKTYSI  TVKGFVDSNA  KVPAGAQAFL120
QVVNSYAWLA  GSDFVAGKAF  TLSGKYTVDT  SKDDGIRVQS  NDEGKEVPFY  IGDISITEEA180
VEEVPEDPSR  PKAETFKTIT  FEDKTTGGFG  ARSGEGGEKL  TVTKEANHTD  GGSYALKVEN240
RTMTWHGPSM  NVEKFVSQGS  EYKVTAWVKL  ASPESSQLQL  STQVGNGGTA  SYVSLAAKTI300
STSDGWVKYE  GTYRYNNVSS  EYITIYVESA  SSANASFYID  DISFEQTGSG  PIKIQNDLES360
IKNVYKKDFL  IGNAIAAEDM  EGVRLDLLKK  HFNVMTAGNA  MKPDALQPTK  GNFTFADADK420
LVDKVLAEGF  EMHGHTLVWH  QQSPAWLNTK  VDASGNAVPL  SREEALTNLK  THIKTVVEHY480
GNKVISWDVV  NEGMNDNPSN  PEDWRGALRQ  SPWYQAIGPD  YMEQAFLAAR  EVLDAHPDWD540
VKLYYNDYND  DNQNKSKAIY  YMVKELNEKY  AKTHPGKLLI  DGVGMQAHYN  MSTNPSNVEL600
SLERFISLGV  EVSITELDVQ  AGSDFKLTDE  IANAQGYLYA  QLFDIYKKHA  ANISRITIWG660
LDDGTSWRSS  TNPLPFDKNL  QAKPAFFGTV  DPAKFMNEHQ  PQTPKNAKYT  TARYGTPVID720
GTVDSVWSKA  QDIPINQYQM  AWQGATGTAK  ALWDDKNLYV  LVQVSDSELD  KKSVNTYEQD780
SVEVFIDENN  GKTTFYQDDD  GQYRVNYDNE  TSFNPESIST  GFKSATKVSG  TSYTVEIKIP840
LKSVTPSNNL  KIGFDVQIND  AKDGSRKSVA  TWNDTTGNGY  QDTSVYGVLT  LSNSDSNNTS900
QYITRGEFID  SIIKALGLNK  NVQVKDSFKD  VTKDSSYYAS  VSVAYQKGIV  SGYKNGEFKP960
QAKITRQEAM  TIIAKAMKAA  GKNVNYSADE  INKILKEFKD  SNKVAGWAKG  SVAACIKAGI1020
VSGKSGKMLA  PQENITFSQT  ESIVKKLSAK  1050

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help