Information for CAZyme ID: ACK46663.1
Basic Information
| GenBank ID | ACK46663.1 |
| Family | GH43_4 |
| Sequence Length | 1143 |
| UniProt ID | B8EEQ5(100,100) |
| Average pLDDT? | 90.20 |
| CAZy50 ID | 8611 |
| CAZy50 Rep | No, UFN57543.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 407976 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella baltica |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKLSKLMLAM TGIIVLGGCG GDGDSGSLPP NMVPENQQLP DPTIKQEMLD FNDLAVHDPS | 60 |
| IIKADDTYYV FGSHLAAAKS TDLMNWQYLT RIEPVLDANG EPVLDDDNNP VTITRIANAP | 120 |
| TDQNPLFNTV SSEMAAAFKW TGDKVQGSWA PDVIKLKDGK YYFYYDFCNN PDDPGYPTPV | 180 |
| CNAPRSFIGV AVADAIEGPY VDKGVFLRSG LTADEITQGL GPDGVTAYNG GTMPNTIDPA | 240 |
| VFYDKNGQLW MTYGSYFGGI WILKIDEATA KPFPNQGYGK RLTGGEFAAN EGSYILYSPD | 300 |
| ANYYYLFTSI GGFAANGGYN IRVSRSENPD GPYVDASGYD MTQVYKNPEE HGNKILGGFE | 360 |
| FVAEKGDTGS TQGYLSPGHN SAYFDKNTGK YFLVIHTRFP NRDEQHSVRV HEMFINADGW | 420 |
| LVVSPHRYAP IDGDNVVDAL DLVGDYRFIN FEKDTNTSPK TSVYLTLTES RLVKGEVTGK | 480 |
| YRLYDNEPNR ITLTLDNLGT FEGTLAWQWD ETLAKLVPTF SALSNEGVSV WGSKLLDKTS | 540 |
| EQLLTDIGNS IDVISEATGG VIALPTRGTR GATIEWTSSD ATVIHPDGTV VRPNVGEGDK | 600 |
| VVTLTATIMV NGKKVTKTYQ VTVFARKTYN RIAQYSFENN LTDSLGLFAA GQPTGDRIFK | 660 |
| AADSVSYSMG LEGEALALDG AHGVLLPTGI ISSYEYTVSF WANPTVITGF STAFFGAVNE | 720 |
| ETAADGGKFS NTWISMLPQG WDGNTMFWSN GSAWFDGVTG ERIPENTWSH VAFSVSNGLV | 780 |
| RVFINGVEKF SRGNLSDYFS GQQGVFGLGV NYWDLPYNGL IDELKVYEAA LTAGEVKALD | 840 |
| IDKLPDSELL ASAVDILDLG DLSSVRENLH LPVTGPYAAA ITWVSSDPTI IDTTGGVTQP | 900 |
| GREDTDKVVT LTATIKLGQA TQTKVFIANV KSMAPPTPLA VYSFEDNLTD STAHFGAGTV | 960 |
| VGNLIGTTGG TITYTDGAVG KAAVFDGKSG IELPNNLIKD NSYSVSLWLN PKVLNKYTSA | 1020 |
| LFSYASASSW TSVLPGGQND YEHAVLWSGE AWYDGRTGFT MPKETWSHMV YTVNGGDLKV | 1080 |
| YINGNLLFTG ANFPNVFSVP TTKFAVGVNF WDTPFTGSID EIKFYDEAIS EQDVQDLFGE | 1140 |
| SNQ | 1143 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.20 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH43_4(56-421)+CBM40(1064-1136)
| MKLSKLMLAM TGIIVLGGCG GDGDSGSLPP NMVPENQQLP DPTIKQEMLD FNDLAVHDPS | 60 |
| IIKADDTYYV FGSHLAAAKS TDLMNWQYLT RIEPVLDANG EPVLDDDNNP VTITRIANAP | 120 |
| TDQNPLFNTV SSEMAAAFKW TGDKVQGSWA PDVIKLKDGK YYFYYDFCNN PDDPGYPTPV | 180 |
| CNAPRSFIGV AVADAIEGPY VDKGVFLRSG LTADEITQGL GPDGVTAYNG GTMPNTIDPA | 240 |
| VFYDKNGQLW MTYGSYFGGI WILKIDEATA KPFPNQGYGK RLTGGEFAAN EGSYILYSPD | 300 |
| ANYYYLFTSI GGFAANGGYN IRVSRSENPD GPYVDASGYD MTQVYKNPEE HGNKILGGFE | 360 |
| FVAEKGDTGS TQGYLSPGHN SAYFDKNTGK YFLVIHTRFP NRDEQHSVRV HEMFINADGW | 420 |
| LVVSPHRYAP IDGDNVVDAL DLVGDYRFIN FEKDTNTSPK TSVYLTLTES RLVKGEVTGK | 480 |
| YRLYDNEPNR ITLTLDNLGT FEGTLAWQWD ETLAKLVPTF SALSNEGVSV WGSKLLDKTS | 540 |
| EQLLTDIGNS IDVISEATGG VIALPTRGTR GATIEWTSSD ATVIHPDGTV VRPNVGEGDK | 600 |
| VVTLTATIMV NGKKVTKTYQ VTVFARKTYN RIAQYSFENN LTDSLGLFAA GQPTGDRIFK | 660 |
| AADSVSYSMG LEGEALALDG AHGVLLPTGI ISSYEYTVSF WANPTVITGF STAFFGAVNE | 720 |
| ETAADGGKFS NTWISMLPQG WDGNTMFWSN GSAWFDGVTG ERIPENTWSH VAFSVSNGLV | 780 |
| RVFINGVEKF SRGNLSDYFS GQQGVFGLGV NYWDLPYNGL IDELKVYEAA LTAGEVKALD | 840 |
| IDKLPDSELL ASAVDILDLG DLSSVRENLH LPVTGPYAAA ITWVSSDPTI IDTTGGVTQP | 900 |
| GREDTDKVVT LTATIKLGQA TQTKVFIANV KSMAPPTPLA VYSFEDNLTD STAHFGAGTV | 960 |
| VGNLIGTTGG TITYTDGAVG KAAVFDGKSG IELPNNLIKD NSYSVSLWLN PKVLNKYTSA | 1020 |
| LFSYASASSW TSVLPGGQND YEHAVLWSGE AWYDGRTGFT MPKETWSHMV YTVNGGDLKV | 1080 |
| YINGNLLFTG ANFPNVFSVP TTKFAVGVNF WDTPFTGSID EIKFYDEAIS EQDVQDLFGE | 1140 |
| SNQ | 1143 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.