CAZyme3D

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Entry ID

Information for CAZyme ID: ACD22897.1

Basic Information

GenBank IDACD22897.1
FamilyGH32
Sequence Length485
UniProt IDB2TR63(100,100)Download
Average pLDDT?96.13
CAZy50 ID71851
CAZy50 RepNo, AQS16525.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID935198
KingdomBacteria
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium botulinum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MQDKNVYEEI  NKDLDRYYKN  SNNSKWRNNF  HLEMPFGLLN  DPNGLSYYNN  KFHIFYQWNP60
FGCEHKNKHW  GLVKTSDFIN  FTKPEIILKP  VDWFDKNGCY  SGGAYVKDDT  LKLFYTGNVK120
DENNNRESYQ  CIANYYKDGT  FEKKGPVIFK  QPEGYTAHFR  DPFIFEEDNI  YYMVLGVQTD180
RLKGRTLLYK  SIDIEKWEFI  GELKTDLDDF  GYMWECPNLV  KVSDNKFAFL  FSPQGLEAEE240
LRNQNIYQSG  HIIGDLDLND  VSLNNHSDFK  ELDMGFDFYA  PQVFKHDNQN  IMLGWIGMPD300
KDSEYLSSKE  GWMFSLTMPR  ALEYKNNVIY  QKPLKQLEAL  RDKKEIEISN  DEFDLYKMKL360
NSRNKEVKLN  LDIKESENIE  IVFNFGDENI  RLNYNKKSEV  CTIDRNNMEL  GGKGIRKFKL420
KAEDNLDLHI  FIDNSVMEIY  YQDGLEVTTF  MYFPKEECLD  IEIKDNSKVK  INELNVWNLR480
SVRYE485

Predicted 3D structure by AlphaFold2 with pLDDT = 96.13 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH32(31-333)

MQDKNVYEEI  NKDLDRYYKN  SNNSKWRNNF  HLEMPFGLLN  DPNGLSYYNN  KFHIFYQWNP60
FGCEHKNKHW  GLVKTSDFIN  FTKPEIILKP  VDWFDKNGCY  SGGAYVKDDT  LKLFYTGNVK120
DENNNRESYQ  CIANYYKDGT  FEKKGPVIFK  QPEGYTAHFR  DPFIFEEDNI  YYMVLGVQTD180
RLKGRTLLYK  SIDIEKWEFI  GELKTDLDDF  GYMWECPNLV  KVSDNKFAFL  FSPQGLEAEE240
LRNQNIYQSG  HIIGDLDLND  VSLNNHSDFK  ELDMGFDFYA  PQVFKHDNQN  IMLGWIGMPD300
KDSEYLSSKE  GWMFSLTMPR  ALEYKNNVIY  QKPLKQLEAL  RDKKEIEISN  DEFDLYKMKL360
NSRNKEVKLN  LDIKESENIE  IVFNFGDENI  RLNYNKKSEV  CTIDRNNMEL  GGKGIRKFKL420
KAEDNLDLHI  FIDNSVMEIY  YQDGLEVTTF  MYFPKEECLD  IEIKDNSKVK  INELNVWNLR480
SVRYE485

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help