CAZyme3D

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Entry ID

Information for CAZyme ID: ACD22137.1

Basic Information

GenBank IDACD22137.1
FamilyGT108
Sequence Length305
UniProt IDB2TLG2(100,100)Download
Average pLDDT?96.80
CAZy50 ID138756
CAZy50 RepNo, AEV20975.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID935198
KingdomBacteria
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium botulinum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKDMKTCEIL  LAEYLKSESK  IYGVEKINFI  NVGENDVYNI  SAPFVDNDKT  IIAGRVEARD60
SEHSTVYFFE  KNDEGWSPID  SYPTFSLQDP  FFTKINNELI  VGGVEIFPHP  EIEGTLKWRT120
IFYKGKDVAS  LERFFVGPDG  MKDLRLVQLL  DKRIGVLTRP  QGEKGGRGRI  GFSIINTLEE180
LNIKVIEESP  LLDGLFVDEE  WGGANEARPL  NETTLGILGH  VACFDKDGNR  HYYPMTFELN240
INTLEVKNQK  LIAVRKDFKP  GQAKRPDLED  VVFSGGLEIK  EDKATLYAGI  SDAEAQFIII300
DNPFK305

Predicted 3D structure by AlphaFold2 with pLDDT = 96.80 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT108(17-305)

MKDMKTCEIL  LAEYLKSESK  IYGVEKINFI  NVGENDVYNI  SAPFVDNDKT  IIAGRVEARD60
SEHSTVYFFE  KNDEGWSPID  SYPTFSLQDP  FFTKINNELI  VGGVEIFPHP  EIEGTLKWRT120
IFYKGKDVAS  LERFFVGPDG  MKDLRLVQLL  DKRIGVLTRP  QGEKGGRGRI  GFSIINTLEE180
LNIKVIEESP  LLDGLFVDEE  WGGANEARPL  NETTLGILGH  VACFDKDGNR  HYYPMTFELN240
INTLEVKNQK  LIAVRKDFKP  GQAKRPDLED  VVFSGGLEIK  EDKATLYAGI  SDAEAQFIII300
DNPFK305

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help