Information for CAZyme ID: ACA85442.1
Basic Information
| GenBank ID | ACA85442.1 |
| Family | GH3 |
| Sequence Length | 862 |
| UniProt ID | B1KHD4(100,100) |
| Average pLDDT? | 89.53 |
| CAZy50 ID | 10057 |
| CAZy50 Rep | No, AWL11389.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 392500 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella woodyi |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSVLAYKRSL LSITILAITM TSGCSKEVAP QKEDLEPKEG LQSYAFGGKA VDINIWPALE | 60 |
| LPHRNSSEVE GKVAEILAGM TLEQKVAQMI QPEIRDISVE DMRQYGFGSY LNGGGAYPNN | 120 |
| DKHALPSDWI ALAENMYQAS VDASLDGSSI PTMWGTDAVH GHNNVIGATL FPHNIGLGAA | 180 |
| NNPELIREVA AITAKEVMVT GIDWVFAPTV AVVRDDRWGR TYEGYSEDPE IVLAYSAAIV | 240 |
| EGLQGEASGD EFLSSEHVIS TVKHFLGDGG TEKGVDQGDN LIDEQGLFDL HGQGYVGGLV | 300 |
| AGSQSVMASF NSWHGVKNHG NEYLLTDVLK TRMGFDGFVV GDWNGHGQVL GCTNETCPQA | 360 |
| VNAGLDMFMV PTDAWKPLYE NTIAEVRSGQ ISQARIDDAV SRILRVKVRA GLFNKPSPAN | 420 |
| RPLSGKLELI GHESHRQVAK QAVRESLVLL KNGHNTLPLS PKMRVLVAGD GANNIGKQSG | 480 |
| GWSITWQGTD NQNSDFPGAS SIYDGIKETV LKAGGTATLD IAGQYSEENR PDVAIVVFGE | 540 |
| EPYAEGNGDI DNLEYQRGDK RDLALLKRLK SEGIPVVSIF ITGRPLWVNP ELNASDSFVV | 600 |
| AWLPGSEGDA VADVLFSSSD GQVVNDMTGK LSFSWPSTPM QAVVNRFDKD YQPLFKYGHG | 660 |
| LSYADKGDSA LVSEIKPVDS DILRPLVILK NAVKAPWRLS IGTSADQDLI NTSLQTSGPV | 720 |
| VMRTIDRVVQ EDARKFNLDG KEQGVIRFGA NFTRDLRAYE QGNTAVSFDI KLDEFTPQST | 780 |
| QLSMVCDKAC GVPVALEEKF KQIAGTGWQT ISVDLACFEL SSDQLSKVQS PFLFSSKAKI | 840 |
| TMSLSNIYWL PDYQGQPDVS CH | 862 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.53 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH3(149-370)
| MSVLAYKRSL LSITILAITM TSGCSKEVAP QKEDLEPKEG LQSYAFGGKA VDINIWPALE | 60 |
| LPHRNSSEVE GKVAEILAGM TLEQKVAQMI QPEIRDISVE DMRQYGFGSY LNGGGAYPNN | 120 |
| DKHALPSDWI ALAENMYQAS VDASLDGSSI PTMWGTDAVH GHNNVIGATL FPHNIGLGAA | 180 |
| NNPELIREVA AITAKEVMVT GIDWVFAPTV AVVRDDRWGR TYEGYSEDPE IVLAYSAAIV | 240 |
| EGLQGEASGD EFLSSEHVIS TVKHFLGDGG TEKGVDQGDN LIDEQGLFDL HGQGYVGGLV | 300 |
| AGSQSVMASF NSWHGVKNHG NEYLLTDVLK TRMGFDGFVV GDWNGHGQVL GCTNETCPQA | 360 |
| VNAGLDMFMV PTDAWKPLYE NTIAEVRSGQ ISQARIDDAV SRILRVKVRA GLFNKPSPAN | 420 |
| RPLSGKLELI GHESHRQVAK QAVRESLVLL KNGHNTLPLS PKMRVLVAGD GANNIGKQSG | 480 |
| GWSITWQGTD NQNSDFPGAS SIYDGIKETV LKAGGTATLD IAGQYSEENR PDVAIVVFGE | 540 |
| EPYAEGNGDI DNLEYQRGDK RDLALLKRLK SEGIPVVSIF ITGRPLWVNP ELNASDSFVV | 600 |
| AWLPGSEGDA VADVLFSSSD GQVVNDMTGK LSFSWPSTPM QAVVNRFDKD YQPLFKYGHG | 660 |
| LSYADKGDSA LVSEIKPVDS DILRPLVILK NAVKAPWRLS IGTSADQDLI NTSLQTSGPV | 720 |
| VMRTIDRVVQ EDARKFNLDG KEQGVIRFGA NFTRDLRAYE QGNTAVSFDI KLDEFTPQST | 780 |
| QLSMVCDKAC GVPVALEEKF KQIAGTGWQT ISVDLACFEL SSDQLSKVQS PFLFSSKAKI | 840 |
| TMSLSNIYWL PDYQGQPDVS CH | 862 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.