CAZyme3D

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Entry ID

Information for CAZyme ID: ACA61147.1

Basic Information

GenBank IDACA61147.1
FamilyGH130
Sequence Length391
UniProt IDB1PLJ0(100,100)Download
Average pLDDT?97.48
CAZy50 ID16649
CAZy50 RepNo, BEI59196.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID358574
Kingdom
Phylum
Class
Order
Family
Genus
Speciesuncultured microorganism

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MNSFDERLLR  LRREQEELLE  LVNRPIEDNG  IFERYEHPVL  TAAHAPLEWR  YDLNPKTNPY60
LMERFGIHAA  FNSGAIKWED  RYVLVVRVEA  ADRKSFFAVA  ESPNGVDNFQ  FWQRPITMPE120
WGEPATNVYD  MRLTRHEDGW  IYGLFCVERK  DPTAKPGDLS  SAVAACGIAR  THDLIEWERL180
PDLKSASQQR  NVVLHPEFVH  GKYALYTRPQ  DGFIDAGGGG  GIGWALVDDI  TNAEVKDEKI240
ISARHYHTVM  EVKNGEGPHP  IKTPQGWLHL  AHGVRGCASG  LRYVLYMYMT  ALDDPSRVIA300
EPAGFLMVPE  GGEYIGDVMN  VLFSNGWIAD  PDGKVFLYYA  SCDTRMHVAT  STVDRLVDYC360
LHTAPDGFRT  GETVERLNQL  IDINLEYTKT  L391

Predicted 3D structure by AlphaFold2 with pLDDT = 97.48 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH130(49-360)

MNSFDERLLR  LRREQEELLE  LVNRPIEDNG  IFERYEHPVL  TAAHAPLEWR  YDLNPKTNPY60
LMERFGIHAA  FNSGAIKWED  RYVLVVRVEA  ADRKSFFAVA  ESPNGVDNFQ  FWQRPITMPE120
WGEPATNVYD  MRLTRHEDGW  IYGLFCVERK  DPTAKPGDLS  SAVAACGIAR  THDLIEWERL180
PDLKSASQQR  NVVLHPEFVH  GKYALYTRPQ  DGFIDAGGGG  GIGWALVDDI  TNAEVKDEKI240
ISARHYHTVM  EVKNGEGPHP  IKTPQGWLHL  AHGVRGCASG  LRYVLYMYMT  ALDDPSRVIA300
EPAGFLMVPE  GGEYIGDVMN  VLFSNGWIAD  PDGKVFLYYA  SCDTRMHVAT  STVDRLVDYC360
LHTAPDGFRT  GETVERLNQL  IDINLEYTKT  L391

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help