CAZyme3D

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Entry ID

Information for CAZyme ID: ACA40658.1

Basic Information

GenBank IDACA40658.1
FamilyAA10
Sequence Length427
UniProt IDB1HQ15(100,100)Download
Average pLDDT?87.39
CAZy50 ID69987
CAZy50 RepNo, AOH54809.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID444177
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyBacillaceae
GenusLysinibacillus
SpeciesLysinibacillus sphaericus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MMNTKFSKLS  KKGLSAALLA  AGIIGISTAP  NAYAHGFVEK  PASRAALCTQ  NYGALNLMCG60
SIMYEPQSLE  APKGFPQSGP  LDGKIASAGG  LFGGILDQQT  ADRWYKNTIT  GGPNTFTWKY120
TAPHLTSKWH  YYITKRDWNP  NKPLTRADLE  PIGTVAHNGT  AASTNLTHTI  NVPTDRNGYH180
VILAVWDVAD  TSNAFYNVID  INLVNNGGNV  DMEAPSQPNG  LHTTKVTSTS  AELKWNPSTD240
NVGVKEYQVL  RDGKVVATIP  GTTFIDKHLN  SNTTYTYSVK  AVDAAGNVST  VSESLVVKTL300
NAAPDTESPT  QPTSLHTMGI  TSSSVDLMWG  ASEDNVAVDH  YVIYRGSTKE  QMSAVGTSTI360
PSFMDMNLQS  STSYMYAVTA  VDAAGNESIK  SSILTVTTKE  QGASYEQWSP  FKAYKKGDKV420
EYQGKNL427

Predicted 3D structure by AlphaFold2 with pLDDT = 87.39 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : AA10(35-202)+CBM5(405-426)

MMNTKFSKLS  KKGLSAALLA  AGIIGISTAP  NAYAHGFVEK  PASRAALCTQ  NYGALNLMCG60
SIMYEPQSLE  APKGFPQSGP  LDGKIASAGG  LFGGILDQQT  ADRWYKNTIT  GGPNTFTWKY120
TAPHLTSKWH  YYITKRDWNP  NKPLTRADLE  PIGTVAHNGT  AASTNLTHTI  NVPTDRNGYH180
VILAVWDVAD  TSNAFYNVID  INLVNNGGNV  DMEAPSQPNG  LHTTKVTSTS  AELKWNPSTD240
NVGVKEYQVL  RDGKVVATIP  GTTFIDKHLN  SNTTYTYSVK  AVDAAGNVST  VSESLVVKTL300
NAAPDTESPT  QPTSLHTMGI  TSSSVDLMWG  ASEDNVAVDH  YVIYRGSTKE  QMSAVGTSTI360
PSFMDMNLQS  STSYMYAVTA  VDAAGNESIK  SSILTVTTKE  QGASYEQWSP  FKAYKKGDKV420
EYQGKNL427

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help