Information for CAZyme ID: ABV86840.1
Basic Information
GenBank ID | ABV86840.1 |
Family | CBM0, CBM40, GH33 |
Sequence Length | 949 |
UniProt ID | A8H2Q3(100,100)![]() |
Average pLDDT? | 87.22 |
CAZy50 ID | 16552 |
CAZy50 Rep | No, UJF22921.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 398579 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Gammaproteobacteria |
Order | Alteromonadales |
Family | Shewanellaceae |
Genus | Shewanella |
Species | Shewanella pealeana |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MLRTITLTAL FITLCSMGFS SGYAQANTLV ANFDAMNETS PTIQGWSDFL SGQATGSVAQ | 60 |
DLNAASWKST GSSGRAQWNM VPTTELNNEA SLKGWRMSWT SRVESGGYIT DYYANGALRF | 120 |
LPILSISASG DLVVNLVGGG EHTLVSGTGA DSYHQYVVEY DPLTQLASFS FDGVIIDPAW | 180 |
VGEASNQNMI AWGNGSSNIN GVAYYRAVTF ETLSETVPEE AKIIAAWDSS GVTFDGESQF | 240 |
ISINTELASV QQLARGSIFT KFKATGTTAT LFSASNSAVG SSEFAILING DGTLRVHARE | 300 |
NGSFVNDSKT VTTFNNNQEH KALIMVDANG TQIYVDGRLA FSGNATSFLS AIAGLDSMNI | 360 |
GRNHDSNGGQ WYFSGTIDET RIYDNVLTAE QAEDLTRLST VVATFDSNLN TDPLLAGWTN | 420 |
DSVDSGAGSL VNEQGQAAWQ ARGINGRAEW EIQPSVQVNR DATTLGWKMT TTSRIVSGSA | 480 |
ISDYYANGNK RFLALLSING NGDLVAALEG GSSHTLVPMT GADKYHTYEV TYDVETSLAT | 540 |
FYFDGIAIET WAGSATSQNV IVWGNGSSGT NGVANYRYVN FETFGSGPAI FESIVFQGGQ | 600 |
EGDDGMSHYR IPSMVQSADG SILAFIEGRP SGGDPGQVGQ INISLKRSID NGRSWLPVQI | 660 |
IHQDPAFDYS DPRPFVDKST NTVYVFYVQW PDLCAQNGNC VAPDDANYLY YRKSIDNGLT | 720 |
WSAAVDVTSQ VKDPTWRSIN PGPGQGIQLQ WQTLAQGEHN GRMIFPAIVR AGNSLFYVAT | 780 |
VFSDDNGLTW HKGEFTPVSG PTEADMVELN DGTLLLSARN DGGAAGTRYH FLSHDGGITW | 840 |
TQTSHDLAVS KVDIGLTRFS AIRAGDAEDL IIATAPIGTT SGPNRNNLGI WVSTDEGANF | 900 |
GTPHQLVYGM SAYSDVVRLN DGSIGVIYEA TGSTLLKFLN FELSSLERQ | 949 |
Predicted 3D structure by AlphaFold2 with pLDDT = 87.22 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM40(235-399)+GH33(595-934)
MLRTITLTAL FITLCSMGFS SGYAQANTLV ANFDAMNETS PTIQGWSDFL SGQATGSVAQ | 60 |
DLNAASWKST GSSGRAQWNM VPTTELNNEA SLKGWRMSWT SRVESGGYIT DYYANGALRF | 120 |
LPILSISASG DLVVNLVGGG EHTLVSGTGA DSYHQYVVEY DPLTQLASFS FDGVIIDPAW | 180 |
VGEASNQNMI AWGNGSSNIN GVAYYRAVTF ETLSETVPEE AKIIAAWDSS GVTFDGESQF | 240 |
ISINTELASV QQLARGSIFT KFKATGTTAT LFSASNSAVG SSEFAILING DGTLRVHARE | 300 |
NGSFVNDSKT VTTFNNNQEH KALIMVDANG TQIYVDGRLA FSGNATSFLS AIAGLDSMNI | 360 |
GRNHDSNGGQ WYFSGTIDET RIYDNVLTAE QAEDLTRLST VVATFDSNLN TDPLLAGWTN | 420 |
DSVDSGAGSL VNEQGQAAWQ ARGINGRAEW EIQPSVQVNR DATTLGWKMT TTSRIVSGSA | 480 |
ISDYYANGNK RFLALLSING NGDLVAALEG GSSHTLVPMT GADKYHTYEV TYDVETSLAT | 540 |
FYFDGIAIET WAGSATSQNV IVWGNGSSGT NGVANYRYVN FETFGSGPAI FESIVFQGGQ | 600 |
EGDDGMSHYR IPSMVQSADG SILAFIEGRP SGGDPGQVGQ INISLKRSID NGRSWLPVQI | 660 |
IHQDPAFDYS DPRPFVDKST NTVYVFYVQW PDLCAQNGNC VAPDDANYLY YRKSIDNGLT | 720 |
WSAAVDVTSQ VKDPTWRSIN PGPGQGIQLQ WQTLAQGEHN GRMIFPAIVR AGNSLFYVAT | 780 |
VFSDDNGLTW HKGEFTPVSG PTEADMVELN DGTLLLSARN DGGAAGTRYH FLSHDGGITW | 840 |
TQTSHDLAVS KVDIGLTRFS AIRAGDAEDL IIATAPIGTT SGPNRNNLGI WVSTDEGANF | 900 |
GTPHQLVYGM SAYSDVVRLN DGSIGVIYEA TGSTLLKFLN FELSSLERQ | 949 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.