Information for CAZyme ID: ABO07048.1
Basic Information
| GenBank ID | ABO07048.1 |
| Family | GH13_26 |
| Sequence Length | 930 |
| UniProt ID | A0A6C6YW85(100,100) |
| Average pLDDT? | 93.27 |
| CAZy50 ID | 2815 |
| CAZy50 Rep | No, UQO69846.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 320389 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Burkholderia |
| Species | Burkholderia mallei |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKPRATLRLQ LHAGFTFDDA AAHVGYFARL GVSHLYLSPI TAAEPGSRHG YDVIDYSTVN | 60 |
| PELGGEAAFV RLIDALRRRG MGAIVDIVPN HMGVGGSSNR WWNDVLEWGA RSRFARHFDI | 120 |
| DWHASDPALQ RKVLLPCLGR PYGEALAAGD IALRADAAHG RFAIACAGRT LPVQIGAYPD | 180 |
| ILRAANRSDL NALAERFDAP GARPSNHARL DAAHAALRDY AAARGPGALD AVLHGFDPRI | 240 |
| ARSREMLHRL LEQQHYRLAW WRTATDEINW RRFFDISTLA CMRIEDAAVF DDVHALLWRL | 300 |
| YAAGLVDGVR IDHVDGLADP RGYCRQLRGR LAALRDGEPY IVVEKILAPD ERLPEDWRVD | 360 |
| GTTGYDFMND VSALLHDAAG AAPLAALWAD MTGAETTFAR EALDGKRRVL ARQFAAEHER | 420 |
| VARAMHRLAR ASRDARDFAL NPIRRAVAEL AIRLPVYRLY PSAGAPQRTD RALLAGAWQA | 480 |
| ARSAIAPADR AALDYVAATL GLPGVARAVA GLGDPARLAA RVGFAQLTAP LAAKGVEDTA | 540 |
| CYRYGRLLSR NEVGAHADAL SLAPGAFHTR NRRRRRTFPG ALLATATHDH KRGEDARARL | 600 |
| AVLSEAHRAW RAAALDWAAF NAPHHHGAPA AADRIPGPAA EAMLYQTLVG AWPPALAPDD | 660 |
| APGLAALTDR VERWQLKALR EAKRDTDWLE PNLGYEAGCA AFLRAIMTPR GPDDFAHRLH | 720 |
| RLVARIAPAG IVNSLSQAAL RLLSPGVPDL YQGAQTWDHT LVDPDNRADV PFARYAAQRI | 780 |
| DAPVAAYLRD WADGRVKHAL IGRLLALRAA HPETFAAGAY VPLHVRGTRR GHALAFARRD | 840 |
| ASTTIVVIAT RLAYPLLGDA PARPCVEAAC WADTAVGLAP GFAGPWRDML NDGTLDAPSG | 900 |
| MLPLAAALAH LPVAVLIREG GAADTPRRGA | 930 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.27 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH13_26(24-374)
| MKPRATLRLQ LHAGFTFDDA AAHVGYFARL GVSHLYLSPI TAAEPGSRHG YDVIDYSTVN | 60 |
| PELGGEAAFV RLIDALRRRG MGAIVDIVPN HMGVGGSSNR WWNDVLEWGA RSRFARHFDI | 120 |
| DWHASDPALQ RKVLLPCLGR PYGEALAAGD IALRADAAHG RFAIACAGRT LPVQIGAYPD | 180 |
| ILRAANRSDL NALAERFDAP GARPSNHARL DAAHAALRDY AAARGPGALD AVLHGFDPRI | 240 |
| ARSREMLHRL LEQQHYRLAW WRTATDEINW RRFFDISTLA CMRIEDAAVF DDVHALLWRL | 300 |
| YAAGLVDGVR IDHVDGLADP RGYCRQLRGR LAALRDGEPY IVVEKILAPD ERLPEDWRVD | 360 |
| GTTGYDFMND VSALLHDAAG AAPLAALWAD MTGAETTFAR EALDGKRRVL ARQFAAEHER | 420 |
| VARAMHRLAR ASRDARDFAL NPIRRAVAEL AIRLPVYRLY PSAGAPQRTD RALLAGAWQA | 480 |
| ARSAIAPADR AALDYVAATL GLPGVARAVA GLGDPARLAA RVGFAQLTAP LAAKGVEDTA | 540 |
| CYRYGRLLSR NEVGAHADAL SLAPGAFHTR NRRRRRTFPG ALLATATHDH KRGEDARARL | 600 |
| AVLSEAHRAW RAAALDWAAF NAPHHHGAPA AADRIPGPAA EAMLYQTLVG AWPPALAPDD | 660 |
| APGLAALTDR VERWQLKALR EAKRDTDWLE PNLGYEAGCA AFLRAIMTPR GPDDFAHRLH | 720 |
| RLVARIAPAG IVNSLSQAAL RLLSPGVPDL YQGAQTWDHT LVDPDNRADV PFARYAAQRI | 780 |
| DAPVAAYLRD WADGRVKHAL IGRLLALRAA HPETFAAGAY VPLHVRGTRR GHALAFARRD | 840 |
| ASTTIVVIAT RLAYPLLGDA PARPCVEAAC WADTAVGLAP GFAGPWRDML NDGTLDAPSG | 900 |
| MLPLAAALAH LPVAVLIREG GAADTPRRGA | 930 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.