Information for CAZyme ID: ABN86910.1
Basic Information
GenBank ID | ABN86910.1 |
Family | GT51 |
Sequence Length | 923 |
UniProt ID | A3NIM9(100,100)![]() |
Average pLDDT? | 73.47 |
CAZy50 ID | 11681 |
CAZy50 Rep | No, AIO53918.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 320373 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Betaproteobacteria |
Order | Burkholderiales |
Family | Burkholderiaceae |
Genus | Burkholderia |
Species | Burkholderia pseudomallei |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MASTLARRAA QAAVPRWVWP FARPAGWSLG PVFGPVFGPV FGPVFGPVFG SAFGSAFGSA | 60 |
SGSASGSASG PAFAAFGLAL APLLAAPPVR PRARRNPRPC GSPRRAALPR ARTAASRTLA | 120 |
VAMLAAPLAA HALPAYDDVR RDWRSTDWLL LARDGTPLQR TRVELTERRG DWIALADVSP | 180 |
AFREAIVVSE DKRFYAHSGV DWRGIAGAAW GNLWNERTRG ASTVTMQLAG LLSDTPRRSG | 240 |
QRSLPQKAAQ AMNALRLERG WRKDQILEAY LNLVPFRGET VGLDAMSHAL FGKAPSGLDV | 300 |
RESAVAAALV RAPNASAAKV AERACRILRD LRAAQPCESL DGYVRFVTSA PPGAARDGGE | 360 |
ALAPHFARRV AAEVKPGAGA RVRSTLDAPL QRFARDTLTR ALAELNAPAH RRHVQDGAVV | 420 |
VIDNATGEIR AWVGSSGALS AARDVDAVLA PRQAGSTLKP FLYAQALDER RLTAASLLDD | 480 |
APIDLAAGGG LYIPQNYDKH FKGWVSVRTA LGGSLNVPAV RTLVLVTPHR FARTLTALGL | 540 |
PLAEEGDYYG FSLALGSADV TLLSLANAYR ALANGGVARA TLDVPGGSGS GSGSGSGSRN | 600 |
GNGNGNGNGN GNDAVTSAPF APAVSKSKVG ASAVFPRAVS TKAEPAKPVP TAALSPTSAS | 660 |
TSTAGKPAAH AAAGTRVFSE AAAYIVTDIL ADNNARVRTF GFDSPLATRF FSAVKTGTSK | 720 |
DMRDNWALGY TSRYTVGVWV GNADGSPMWD VSGVTGAAPV WAAIVGYLHR DLASRAPRPP | 780 |
AGVEQRRVAF ERDVEPARPE WFIAGTALDT VRLAAPATAA AGGADRPRAP LSIGAPTDGT | 840 |
IFAIDPDIPP KHQRIWFERA AGRAARFSWR LDGKVIGRGE RLAWMPWPGS HRLELVDARG | 900 |
NVADAVGFEV RGAFAKTAAP PKP | 923 |
Predicted 3D structure by AlphaFold2 with pLDDT = 73.47 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT51(165-319)
MASTLARRAA QAAVPRWVWP FARPAGWSLG PVFGPVFGPV FGPVFGPVFG SAFGSAFGSA | 60 |
SGSASGSASG PAFAAFGLAL APLLAAPPVR PRARRNPRPC GSPRRAALPR ARTAASRTLA | 120 |
VAMLAAPLAA HALPAYDDVR RDWRSTDWLL LARDGTPLQR TRVELTERRG DWIALADVSP | 180 |
AFREAIVVSE DKRFYAHSGV DWRGIAGAAW GNLWNERTRG ASTVTMQLAG LLSDTPRRSG | 240 |
QRSLPQKAAQ AMNALRLERG WRKDQILEAY LNLVPFRGET VGLDAMSHAL FGKAPSGLDV | 300 |
RESAVAAALV RAPNASAAKV AERACRILRD LRAAQPCESL DGYVRFVTSA PPGAARDGGE | 360 |
ALAPHFARRV AAEVKPGAGA RVRSTLDAPL QRFARDTLTR ALAELNAPAH RRHVQDGAVV | 420 |
VIDNATGEIR AWVGSSGALS AARDVDAVLA PRQAGSTLKP FLYAQALDER RLTAASLLDD | 480 |
APIDLAAGGG LYIPQNYDKH FKGWVSVRTA LGGSLNVPAV RTLVLVTPHR FARTLTALGL | 540 |
PLAEEGDYYG FSLALGSADV TLLSLANAYR ALANGGVARA TLDVPGGSGS GSGSGSGSRN | 600 |
GNGNGNGNGN GNDAVTSAPF APAVSKSKVG ASAVFPRAVS TKAEPAKPVP TAALSPTSAS | 660 |
TSTAGKPAAH AAAGTRVFSE AAAYIVTDIL ADNNARVRTF GFDSPLATRF FSAVKTGTSK | 720 |
DMRDNWALGY TSRYTVGVWV GNADGSPMWD VSGVTGAAPV WAAIVGYLHR DLASRAPRPP | 780 |
AGVEQRRVAF ERDVEPARPE WFIAGTALDT VRLAAPATAA AGGADRPRAP LSIGAPTDGT | 840 |
IFAIDPDIPP KHQRIWFERA AGRAARFSWR LDGKVIGRGE RLAWMPWPGS HRLELVDARG | 900 |
NVADAVGFEV RGAFAKTAAP PKP | 923 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.