CAZyme3D

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Entry ID

Information for CAZyme ID: ABN64274.2

Basic Information

GenBank IDABN64274.2
FamilyGT91
Sequence Length617
UniProt IDA3LN63(100,100)Download
Average pLDDT?86.81
CAZy50 ID28699
CAZy50 RepNo, CAG86794.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID322104
KingdomEukaryota
PhylumAscomycota
ClassSaccharomycetes
OrderSaccharomycetales
FamilyDebaryomycetaceae
GenusScheffersomyces
SpeciesScheffersomyces stipitis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

ISKYVGKSKL  IVFPKAFEES  DPKKLYKFYS  SSFDESPPRW  SKIIRFSDPS  QKTDPLSNSI60
KNLKYHKHPV  QSFNAFADIE  GNMEKCGLLE  NKYEIEVSRS  AMKSKSLKKI  EGSFEKNKNP120
YYKELSPFFL  SELKLQIKHN  VVEKYWYRLA  GSSVWLEEYG  VHFMISRVLY  SPKGIRNQPT180
ISLTYAQLYD  KDWNEMVNTR  LVVPSNNMRK  PDLEENIIPD  PPSKKVLDFP  SFLPIPFWHD240
YDNTVGKYYG  PEDPRIILVN  NKLGYQEPLI  VFNAYHRKLA  LFDDDLDDRL  LMKIKFYRSM300
FICWPWQFQR  GKENVDGMPD  PEYDEHFYNR  VTELQIKNLP  RQTTQKNWTP  LVSEMERRTH360
SSGSFVYDTH  INFIYRWANL  EMLRCNLESG  VCGFTYRLND  RLAPRSSVGP  LRGGTQLINI420
NNLIRSQLSE  FNMETILPNN  REIWLGFARA  HLDRCGCGSV  MYRPNLVIVT  MHRDFYKLSH480
VSSSISFDMP  VLGWDLSNPR  ILCTGANILI  PNGISSWNLK  SLTADGNGGW  TADDYMTISL540
SVGDFTVHKI  NIKGLLNEVF  KLNDVLDMKK  ALSNLQIPDP  INASDQCPFQ  GFNNDNVICA600
MQSSRDFCMD  YGFEQVK617

Predicted 3D structure by AlphaFold2 with pLDDT = 86.81 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT91(85-607)

ISKYVGKSKL  IVFPKAFEES  DPKKLYKFYS  SSFDESPPRW  SKIIRFSDPS  QKTDPLSNSI60
KNLKYHKHPV  QSFNAFADIE  GNMEKCGLLE  NKYEIEVSRS  AMKSKSLKKI  EGSFEKNKNP120
YYKELSPFFL  SELKLQIKHN  VVEKYWYRLA  GSSVWLEEYG  VHFMISRVLY  SPKGIRNQPT180
ISLTYAQLYD  KDWNEMVNTR  LVVPSNNMRK  PDLEENIIPD  PPSKKVLDFP  SFLPIPFWHD240
YDNTVGKYYG  PEDPRIILVN  NKLGYQEPLI  VFNAYHRKLA  LFDDDLDDRL  LMKIKFYRSM300
FICWPWQFQR  GKENVDGMPD  PEYDEHFYNR  VTELQIKNLP  RQTTQKNWTP  LVSEMERRTH360
SSGSFVYDTH  INFIYRWANL  EMLRCNLESG  VCGFTYRLND  RLAPRSSVGP  LRGGTQLINI420
NNLIRSQLSE  FNMETILPNN  REIWLGFARA  HLDRCGCGSV  MYRPNLVIVT  MHRDFYKLSH480
VSSSISFDMP  VLGWDLSNPR  ILCTGANILI  PNGISSWNLK  SLTADGNGGW  TADDYMTISL540
SVGDFTVHKI  NIKGLLNEVF  KLNDVLDMKK  ALSNLQIPDP  INASDQCPFQ  GFNNDNVICA600
MQSSRDFCMD  YGFEQVK617

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help