Information for CAZyme ID: ABN05321.1
Basic Information
GenBank ID | ABN05321.1 |
Family | CBM48, GH13_8 |
Sequence Length | 838 |
UniProt ID | A2TIS0(100,100)![]() |
Average pLDDT? | 84.33 |
CAZy50 ID | 937 |
CAZy50 Rep | No, CAG7908015.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 3694 |
Kingdom | Eukaryota |
Phylum | Streptophyta |
Class | Magnoliopsida |
Order | Malpighiales |
Family | Salicaceae |
Genus | Populus |
Species | Populus trichocarpa |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MLGSSSGLLP APPLLPSVAE NSKWAIRYKR CTAKEKPVRL PSGGSKKLLC HSRFCFPLRI | 60 |
SNNDRVRHGF AISAVLTDDP TMTTVGDGLE NIGLVSIDPG LESFKDHFRY RMKRYVDQKK | 120 |
LIERYEGGLE EFALGYQKFG FNRDEGGIVY REWAPAAQEA QIIGDFNGWD GSNHRMEKNE | 180 |
FGVWSIKIPD SGGNPAIPHN SRVKFRFMQG NGVWVDRIPA WIKCATVDPA SFGAPYDGVY | 240 |
WDPPTSERYE FKFPRPPKPN APRIYEAHVG MSSSEPRVNS YREFADNVLP RIRANNYNTV | 300 |
QLMAVIEHSY YASFGYHVTN FFAVSSRSGN PEDLKYLIDK AHSLGLRVLM DVVHSHASNN | 360 |
VTDGLNGFDI GQGAQESYFH TGDRGYHNLW DSRLFNYANW EVLRFLLSNL RWWLEEFKFD | 420 |
GFRFDGVTSM LYHHHGINMA FTGDYNEYFS EATDVDAVVY LMLANYLIHN ILPDATVIAE | 480 |
DVSGMPGLGC PVSEGGVGFD YRLAMAIPDK WIDYLKNKSD LEWSMNEISR SLTNRRYTEK | 540 |
CVAYAESHDQ SIVGDKTIAF ILMDKEMYSG MSCLTEAPPA VDRGIALHKM IHFITMALGG | 600 |
EGYLNFMGNE FGHPEWIDFP REGNGWSYEM CRRQWNLADM EHLRYKFMNA FDRAMNLLDE | 660 |
KYSFLASTKQ IVSSTNEEDK VIVFERGDLV FVFNFHPEKT YDGYKVGCDL PGKYRVALDS | 720 |
DALEFGGHGR VGHDADHFTS PEGIPGVPET NFNNRPNSFK VLSPARTCVV YYRVEESEES | 780 |
HDDDDEMGLN EILAADVIPE QEDVEEAASQ AKVGKPHLVD GDGDGDGEWV MVVDLARQ | 838 |
Predicted 3D structure by AlphaFold2 with pLDDT = 84.33 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM48(138-229)+GH13_8(313-609)
MLGSSSGLLP APPLLPSVAE NSKWAIRYKR CTAKEKPVRL PSGGSKKLLC HSRFCFPLRI | 60 |
SNNDRVRHGF AISAVLTDDP TMTTVGDGLE NIGLVSIDPG LESFKDHFRY RMKRYVDQKK | 120 |
LIERYEGGLE EFALGYQKFG FNRDEGGIVY REWAPAAQEA QIIGDFNGWD GSNHRMEKNE | 180 |
FGVWSIKIPD SGGNPAIPHN SRVKFRFMQG NGVWVDRIPA WIKCATVDPA SFGAPYDGVY | 240 |
WDPPTSERYE FKFPRPPKPN APRIYEAHVG MSSSEPRVNS YREFADNVLP RIRANNYNTV | 300 |
QLMAVIEHSY YASFGYHVTN FFAVSSRSGN PEDLKYLIDK AHSLGLRVLM DVVHSHASNN | 360 |
VTDGLNGFDI GQGAQESYFH TGDRGYHNLW DSRLFNYANW EVLRFLLSNL RWWLEEFKFD | 420 |
GFRFDGVTSM LYHHHGINMA FTGDYNEYFS EATDVDAVVY LMLANYLIHN ILPDATVIAE | 480 |
DVSGMPGLGC PVSEGGVGFD YRLAMAIPDK WIDYLKNKSD LEWSMNEISR SLTNRRYTEK | 540 |
CVAYAESHDQ SIVGDKTIAF ILMDKEMYSG MSCLTEAPPA VDRGIALHKM IHFITMALGG | 600 |
EGYLNFMGNE FGHPEWIDFP REGNGWSYEM CRRQWNLADM EHLRYKFMNA FDRAMNLLDE | 660 |
KYSFLASTKQ IVSSTNEEDK VIVFERGDLV FVFNFHPEKT YDGYKVGCDL PGKYRVALDS | 720 |
DALEFGGHGR VGHDADHFTS PEGIPGVPET NFNNRPNSFK VLSPARTCVV YYRVEESEES | 780 |
HDDDDEMGLN EILAADVIPE QEDVEEAASQ AKVGKPHLVD GDGDGDGEWV MVVDLARQ | 838 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.