CAZyme3D

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Entry ID

Information for CAZyme ID: ABL78492.1

Basic Information

GenBank IDABL78492.1
FamilyCE9
Sequence Length385
UniProt IDA1RZ62(100,100)Download
Average pLDDT?97.54
CAZy50 ID108011
CAZy50 RepNo, AGT35672.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID368408
KingdomArchaea
PhylumThermoproteota
ClassThermoprotei
OrderThermofilales
FamilyThermofilaceae
GenusThermofilum
SpeciesThermofilum pendens

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRVLVKNAHV  LTPLGDLGVV  NVMVKDGVVE  GFDVEAVPDR  VVDAERYYVA  PGFIDTHIHG60
YGGVDVTEAS  AEEILEMSGG  LAEHGVTGFL  ASTVAAPHER  LLQACSNVAA  ASSRWSPSKG120
ARILGVHLEG  PYLNPKMKGA  MNEQYFRKPS  LRELDEYVSA  SRGLVRQVTV  APEVEGALEF180
IEEASRRGIT  VSVGHTDATY  EQALRAVEAG  ARKANHIFNQ  MRGFHHREPG  TAMALLLDTD240
VFVEMIVDFV  HLHPATVRLV  YRLAGPLRTV  LITDAVRAAG  LPDGEYTLGG  LRIVVKEGVS300
RLADSGALAG  STLTMDRAVR  NMTKVGANTL  EALTMASYTP  AKSVGALGRE  RVGLLRPGYA360
ADMVVLDERL  EVKKTIIAGE  VVYEA385

Predicted 3D structure by AlphaFold2 with pLDDT = 97.54 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE9(6-379)

MRVLVKNAHV  LTPLGDLGVV  NVMVKDGVVE  GFDVEAVPDR  VVDAERYYVA  PGFIDTHIHG60
YGGVDVTEAS  AEEILEMSGG  LAEHGVTGFL  ASTVAAPHER  LLQACSNVAA  ASSRWSPSKG120
ARILGVHLEG  PYLNPKMKGA  MNEQYFRKPS  LRELDEYVSA  SRGLVRQVTV  APEVEGALEF180
IEEASRRGIT  VSVGHTDATY  EQALRAVEAG  ARKANHIFNQ  MRGFHHREPG  TAMALLLDTD240
VFVEMIVDFV  HLHPATVRLV  YRLAGPLRTV  LITDAVRAAG  LPDGEYTLGG  LRIVVKEGVS300
RLADSGALAG  STLTMDRAVR  NMTKVGANTL  EALTMASYTP  AKSVGALGRE  RVGLLRPGYA360
ADMVVLDERL  EVKKTIIAGE  VVYEA385

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help