CAZyme3D

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Entry ID

Information for CAZyme ID: ABL74558.1

Basic Information

GenBank IDABL74558.1
FamilyCBM48, GH13_8
Sequence Length818
UniProt IDA1YQH8(100,100)Download
Average pLDDT?86.66
CAZy50 ID937
CAZy50 RepNo, CAG7908015.1
Structure Cluster-
EC Number(s)2.4.1.18
Substrates(s)alpha-glucan

Taxonomy

Tax ID39947
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderPoales
FamilyPoaceae
GenusOryza
SpeciesOryza sativa
PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/A1YQH8.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLCLTSSSSS  APAPLLPSLA  DRPSPGIAGG  GGNVRLSVVS  SPRRSWPGKT  NFSVPATARK60
NKTMVTVVEE  VDHLPIYDLD  PKLEEFKDHF  NYRIKRYLDQ  KCLIEKHEGG  LEEFSKGYLK120
FGINTVDGAT  IYREWAPAAQ  EAQLIGEFNN  WNGAKHKMEK  DKFGIWSIKI  SHVNGKPAIP180
HNSKVKFRFR  HGGGAWVDRI  PAWIRYATFD  ASKFGAPYDG  VHWDPPACER  YVFKHPRPPK240
PDAPRIYEAH  VGMSGEEPEV  STYREFADNV  LPRIRANNYN  TVQLMAIMEH  SYYASFGYHV300
TNFFAVSSRS  GTPEDLKYLV  DKAHSLGLRV  LMDVVHSHAS  NNVTDGLNGY  DVGQNTHESY360
FHTGDRGYHK  LWDSRLFNYA  NWEVLRFLLS  NLRYWMDEFM  FDGFRFDGVT  SMLYHHHGIN420
KGFTGNYKEY  FSLDTDVDAI  VYMMLANHLM  HKLLPEATIV  AEDVSGMPVL  CRPVDEGGVG480
FDFRLAMAIP  DRWIDYLKNK  EDRKWSMSEI  VQTLTNRRYT  EKCIAYAESH  DQSIVGDKTI540
AFLLMDKEMY  TGMSDLQPAS  PTINRGIALQ  KMIHFITMAL  GGDGYLNFMG  NEFGHPEWID600
FPREGNNWSY  DKCRRQWSLV  DTDHLRYKYM  NAFDQAMNAL  EEEFSFLSSS  KQIVSDMNEK660
DKVIVFERGD  LVFVFNFHPN  KTYKGYKVGC  DLPGKYRVAL  DSDALVFGGH  GRVGHDVDHF720
TSPEGMPGVP  ETNFNNRPNS  FKVLSPPRTC  VAYYRVDEDR  EELRRGGAVA  SGKIVTEYID780
VEATSGETIS  GGWKGSEKDD  CGKKGMKFVF  RSSDEDCK818

Predicted 3D structure by AlphaFold2 with pLDDT = 86.66 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM48(121-220)+GH13_8(295-591)

0

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help