Information for CAZyme ID: ABJ53832.1
Basic Information
| GenBank ID | ABJ53832.1 |
| Family | CBM47, GH98 |
| Sequence Length | 1038 |
| UniProt ID | A0A0H2ZMV0(100,100) |
| Average pLDDT? | 91.45 |
| CAZy50 ID | 12623 |
| CAZy50 Rep | No, VFI11699.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 373153 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Streptococcaceae |
| Genus | Streptococcus |
| Species | Streptococcus pneumoniae |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MNKEKIKRKL ITILFVCIGM LCFGLLAGVK ADNRVQMRTT INNESPLLLS PLYGNDNGNG | 60 |
| LWWGNTLKGA WEAIPEDVKP YVAIELHPAK VCKPTSCIPR DTKELREWYV KMLEEAQSLN | 120 |
| IPVFLVIMSA GERNTVPPEW LDEQFQKYSV LKGVLNIENY WIYNNQLAPH SAKYLEVCAK | 180 |
| YGAHFIWHDH EKWFWETIMN DPTFFEASQK YHKNLVLATK NTPIRDDAGT DSIVSGFWLS | 240 |
| GLCDNWGSST DTWKWWEKHY TNTFETGRAR DMRSYASEPE SMIAMEMMNV YTGGGTVYNF | 300 |
| ECAAYTFMTN DVPTPAFTKG IIPFFRHAIQ NPAPSKEEVV NRTKAVFWNG EGRISSLNGF | 360 |
| YQGLYSNDET MPLYNNGRYH ILPVIHEKID KEKISSIFPN AKILTKNSEE LSSKVNYLNS | 420 |
| LYPKLYEGDG YAQRVGNSWY IYNSNANINK NQQVMLPMYT NNTKSLSLDL TPHTYAVVKE | 480 |
| NPNNLHILLN NYRTDKTAMW ALSGNFDASK SWKKEELELA NWISKNYSIN PVDNDFRTTT | 540 |
| LTLKGHTGHK PQINISGDKN HYTYTENWDE NTHVYTITVN HNGMVEMSIN TEGTGPVSFP | 600 |
| TPDKFNDGNL NIAYAKPTTQ SSVDYNGDPN RAVDGNRNGN FNSGSVTHTR ADNPSWWEVD | 660 |
| LKKMDKVGLV KIYNRTDAET QRLSNFDVIL YDNNRNEVAK KHVNNLSGES VSLDFKEKGA | 720 |
| RYIKVKLLTS GVPLSLAEVE VFRESDGKQS EEDIDKITED KVVSTNKVAT QSSTNYEGVA | 780 |
| ALAVDGNKDG DYGHHSVTHT KADSNAWWQV DLGEEFTVSK VDIYNRTDAE PQRLSNFDVI | 840 |
| FLSSSGEEVF RRHFDKVADG LLSLKVPSVG AKLVKIELKS AAIPLSLAEV EVYGSKRTPK | 900 |
| KLSNIALTKE TRQSSTDYNG FSRLAVDGNK NGDYGHHSVT HTKGDSPSWW EIDLAQTEEL | 960 |
| EKLIIYNRTD AEIQRLSNFD IIIYDSNNHE VFKQHIDSLE SNNLSIDLKG LKGKKVRISL | 1020 |
| RNAGIPLSLA EVEVYTYK | 1038 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.45 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH98(35-334)+CBM47(619-739)+CBM47(769-890)+CBM47(912-1032)
| MNKEKIKRKL ITILFVCIGM LCFGLLAGVK ADNRVQMRTT INNESPLLLS PLYGNDNGNG | 60 |
| LWWGNTLKGA WEAIPEDVKP YVAIELHPAK VCKPTSCIPR DTKELREWYV KMLEEAQSLN | 120 |
| IPVFLVIMSA GERNTVPPEW LDEQFQKYSV LKGVLNIENY WIYNNQLAPH SAKYLEVCAK | 180 |
| YGAHFIWHDH EKWFWETIMN DPTFFEASQK YHKNLVLATK NTPIRDDAGT DSIVSGFWLS | 240 |
| GLCDNWGSST DTWKWWEKHY TNTFETGRAR DMRSYASEPE SMIAMEMMNV YTGGGTVYNF | 300 |
| ECAAYTFMTN DVPTPAFTKG IIPFFRHAIQ NPAPSKEEVV NRTKAVFWNG EGRISSLNGF | 360 |
| YQGLYSNDET MPLYNNGRYH ILPVIHEKID KEKISSIFPN AKILTKNSEE LSSKVNYLNS | 420 |
| LYPKLYEGDG YAQRVGNSWY IYNSNANINK NQQVMLPMYT NNTKSLSLDL TPHTYAVVKE | 480 |
| NPNNLHILLN NYRTDKTAMW ALSGNFDASK SWKKEELELA NWISKNYSIN PVDNDFRTTT | 540 |
| LTLKGHTGHK PQINISGDKN HYTYTENWDE NTHVYTITVN HNGMVEMSIN TEGTGPVSFP | 600 |
| TPDKFNDGNL NIAYAKPTTQ SSVDYNGDPN RAVDGNRNGN FNSGSVTHTR ADNPSWWEVD | 660 |
| LKKMDKVGLV KIYNRTDAET QRLSNFDVIL YDNNRNEVAK KHVNNLSGES VSLDFKEKGA | 720 |
| RYIKVKLLTS GVPLSLAEVE VFRESDGKQS EEDIDKITED KVVSTNKVAT QSSTNYEGVA | 780 |
| ALAVDGNKDG DYGHHSVTHT KADSNAWWQV DLGEEFTVSK VDIYNRTDAE PQRLSNFDVI | 840 |
| FLSSSGEEVF RRHFDKVADG LLSLKVPSVG AKLVKIELKS AAIPLSLAEV EVYGSKRTPK | 900 |
| KLSNIALTKE TRQSSTDYNG FSRLAVDGNK NGDYGHHSVT HTKGDSPSWW EIDLAQTEEL | 960 |
| EKLIIYNRTD AEIQRLSNFD IIIYDSNNHE VFKQHIDSLE SNNLSIDLKG LKGKKVRISL | 1020 |
| RNAGIPLSLA EVEVYTYK | 1038 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.