Information for CAZyme ID: ABF39584.1
Basic Information
GenBank ID | ABF39584.1 |
Family | GH2 |
Sequence Length | 597 |
UniProt ID | Q1IU66(100,100)![]() |
Average pLDDT? | 93.68 |
CAZy50 ID | 46783 |
CAZy50 Rep | No, ADW68978.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 204669 |
Kingdom | Bacteria |
Phylum | Acidobacteriota |
Class | Terriglobia |
Order | Terriglobales |
Family | Candidatus Korobacteraceae |
Genus | Candidatus Korobacter |
Species | Candidatus Korobacter versatilis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MPTTHRTQRR SVLIVLVLFA AAATAFAQTP LIANIHARQI TDLSGTWSTI IDAYHVGERN | 60 |
RFYEDRHQTD PSELIEYNFD HSPTLKVPGD WNSQRPELFL YEGTLWYRRI FSYHPAQGKR | 120 |
QFVYFGAANY HATVYLNAQK LGEHSGGYTP FNFEVTGKLK DGENLLVVEV DDRRSKDAIP | 180 |
ALNTDWWNYG GLTREVSLVE VPSAFIENYF IQLAKGSPNE IAGWVQLNSA AGGSEVTIEI | 240 |
PEAKLRQSAK ADEHGRAAFR FPAQLTPWSP DNPKLYEVRI SSGTDHLTDQ IGFRTIEARG | 300 |
TKLYLNGKPI FLRGISIHEE APFRGGRAFA SEDDKTLLGW AKELGCNYVR LAHYPHHESM | 360 |
VREAERMGIL VWSEIPVYWD IDWKNPDSLA QARQQLHEEI ARDQNRAAII LWSIANETPI | 420 |
DPDRLEFLKA LASDVRSLDN TRLLTAALNR TGREGKTRLI DDPLGAVVDV LAINEYIGWY | 480 |
ESRVEDADTT EWKSSWEKPL LFSEFGGGAP YGRHGATNER WTEEYQANLY RHQLTMLRKI | 540 |
PALAGLSPWV LMDFHSPVRL LPGVQDMRNR KGLVSDQGQR KQAFYVLQEY YREMGAH | 597 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.68 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH2(35-506)
MPTTHRTQRR SVLIVLVLFA AAATAFAQTP LIANIHARQI TDLSGTWSTI IDAYHVGERN | 60 |
RFYEDRHQTD PSELIEYNFD HSPTLKVPGD WNSQRPELFL YEGTLWYRRI FSYHPAQGKR | 120 |
QFVYFGAANY HATVYLNAQK LGEHSGGYTP FNFEVTGKLK DGENLLVVEV DDRRSKDAIP | 180 |
ALNTDWWNYG GLTREVSLVE VPSAFIENYF IQLAKGSPNE IAGWVQLNSA AGGSEVTIEI | 240 |
PEAKLRQSAK ADEHGRAAFR FPAQLTPWSP DNPKLYEVRI SSGTDHLTDQ IGFRTIEARG | 300 |
TKLYLNGKPI FLRGISIHEE APFRGGRAFA SEDDKTLLGW AKELGCNYVR LAHYPHHESM | 360 |
VREAERMGIL VWSEIPVYWD IDWKNPDSLA QARQQLHEEI ARDQNRAAII LWSIANETPI | 420 |
DPDRLEFLKA LASDVRSLDN TRLLTAALNR TGREGKTRLI DDPLGAVVDV LAINEYIGWY | 480 |
ESRVEDADTT EWKSSWEKPL LFSEFGGGAP YGRHGATNER WTEEYQANLY RHQLTMLRKI | 540 |
PALAGLSPWV LMDFHSPVRL LPGVQDMRNR KGLVSDQGQR KQAFYVLQEY YREMGAH | 597 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.