Information for CAZyme ID: ABD74493.1
Basic Information
GenBank ID | ABD74493.1 |
Family | CBM70, PL8_1 |
Sequence Length | 522 |
UniProt ID | Q8VLQ6(100,100)![]() |
Average pLDDT? | 79.05 |
CAZy50 ID | 7821 |
CAZy50 Rep | No, BBA92284.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1307 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Bacilli |
Order | Lactobacillales |
Family | Streptococcaceae |
Genus | Streptococcus |
Species | Streptococcus suis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MGFFISQSKQ HYGIRKYKVG VCSALIALSI LGTRVAANQL PSTETASPQS SQLVETTPET | 60 |
TEAVNLTTEA VMTSEVSSEV SPVTSTETQP SSTAAETLAS PQAVQATKEE EKNLVANGEF | 120 |
ASTTAASGNW ADPAATNWET WIPANVKKEN GQVRIDEGRL HISSTASYRV AVHQTVDVDP | 180 |
NKRYLFSYNV ETKDLKGSGV RVRLRSLTAE GKDLSPQEFA YTPYKNGSQA EHIEQILTVS | 240 |
PETRKLKVEL FFENSVGQAW LDNISLVEYV EKTPETPEPS LELVQPETGQ ISLASNKVYL | 300 |
PVRPDLTYRI ADAAVAIVEK NMIRPLAAGK TQVDVYDKDT KLSSFELTVT EHQATVFDTL | 360 |
RNNWEDISLA NKRYQSNDTQ MKAFLGRLDA GVASSLKKWV EPTNQGKTIF NDIDFSKSSH | 420 |
LTTVYRRLEQ MAQVVENPDS AYYHDRSLID LVRKGMNWLY TNVYNENKSI DGNWWDYEIG | 480 |
TPRAVVNTLI YMHPYFSQEE ILTYTKPISK FVPDPTTISV KH | 522 |
Predicted 3D structure by AlphaFold2 with pLDDT = 79.05 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM70(113-271)
MGFFISQSKQ HYGIRKYKVG VCSALIALSI LGTRVAANQL PSTETASPQS SQLVETTPET | 60 |
TEAVNLTTEA VMTSEVSSEV SPVTSTETQP SSTAAETLAS PQAVQATKEE EKNLVANGEF | 120 |
ASTTAASGNW ADPAATNWET WIPANVKKEN GQVRIDEGRL HISSTASYRV AVHQTVDVDP | 180 |
NKRYLFSYNV ETKDLKGSGV RVRLRSLTAE GKDLSPQEFA YTPYKNGSQA EHIEQILTVS | 240 |
PETRKLKVEL FFENSVGQAW LDNISLVEYV EKTPETPEPS LELVQPETGQ ISLASNKVYL | 300 |
PVRPDLTYRI ADAAVAIVEK NMIRPLAAGK TQVDVYDKDT KLSSFELTVT EHQATVFDTL | 360 |
RNNWEDISLA NKRYQSNDTQ MKAFLGRLDA GVASSLKKWV EPTNQGKTIF NDIDFSKSSH | 420 |
LTTVYRRLEQ MAQVVENPDS AYYHDRSLID LVRKGMNWLY TNVYNENKSI DGNWWDYEIG | 480 |
TPRAVVNTLI YMHPYFSQEE ILTYTKPISK FVPDPTTISV KH | 522 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.