Information for CAZyme ID: ABC82243.1
Basic Information
| GenBank ID | ABC82243.1 |
| Family | PL12_3 |
| Sequence Length | 702 |
| UniProt ID | Q2IKR1(100,100) |
| Average pLDDT? | 92.94 |
| CAZy50 ID | 35591 |
| CAZy50 Rep | No, BDG01724.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 290397 |
| Kingdom | Bacteria |
| Phylum | Myxococcota |
| Class | Myxococcia |
| Order | Myxococcales |
| Family | Anaeromyxobacteraceae |
| Genus | Anaeromyxobacter |
| Species | Anaeromyxobacter dehalogenans |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MGAIGYYGYL AARVPPHRLL ATAARRAVRG ARNRLAPPLA PSPRGLLEAL GCDGPAGLAA | 60 |
| LLARPRPARP AWSPEALRRA LERRIPGEVE RALGRAEAAA AGRFVVYGRE VDVRRADGGT | 120 |
| DWQRDPVHGG RFDGRAPSAA LPPAPGLDPK MAWALGRGEH WVALACGAVL HPRAAGGDAL | 180 |
| AEALAASVTD FAAQNPVGRG VHWTCAMEAG LRAWHLATAL WVLALRRAPA PALAAEAARL | 240 |
| LVASGRFVLA NLEDGGAVPN NHLVCDWLGL LACAEALPEW PEAPRWRALA SEGLARTLAE | 300 |
| QVHAEGTSFE GSVPYHRFSL ELFAAGFLLA RAGGPPPALA WRLHAMFRAT RALAAASGDL | 360 |
| PQLGDNDSGH ALALRARGPT EAGYLCALGA ALFRDPALLR PGAPADDAVE AAWLLGPEAL | 420 |
| DWLGRARPGP PPGSVSFPAA GVHVLRRGAL EAFVSCGPHG QRGVGGHDHN DKLSFELRAA | 480 |
| GALAVCDPGM PVYGRAPEVR DAFRSTRAHA TVTVDGLEQS PIPPGRLFAL PDAAGARLLA | 540 |
| FAPGGEAERL AGEHRGFVAR AGVVHRRELA LAGAGLVVVD RLAGRGTHAV ELRWPLAHPA | 600 |
| PRLREASAAE AAALARLARL ARLRRPADPS RVVEVPLGPA GHLLVAFSAP AGLAPELAPS | 660 |
| LRSPGYGELV PASVATLAGP LACPAALATL FLHVAAEGSH PR | 702 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.94 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : PL12_3(440-580)
| MGAIGYYGYL AARVPPHRLL ATAARRAVRG ARNRLAPPLA PSPRGLLEAL GCDGPAGLAA | 60 |
| LLARPRPARP AWSPEALRRA LERRIPGEVE RALGRAEAAA AGRFVVYGRE VDVRRADGGT | 120 |
| DWQRDPVHGG RFDGRAPSAA LPPAPGLDPK MAWALGRGEH WVALACGAVL HPRAAGGDAL | 180 |
| AEALAASVTD FAAQNPVGRG VHWTCAMEAG LRAWHLATAL WVLALRRAPA PALAAEAARL | 240 |
| LVASGRFVLA NLEDGGAVPN NHLVCDWLGL LACAEALPEW PEAPRWRALA SEGLARTLAE | 300 |
| QVHAEGTSFE GSVPYHRFSL ELFAAGFLLA RAGGPPPALA WRLHAMFRAT RALAAASGDL | 360 |
| PQLGDNDSGH ALALRARGPT EAGYLCALGA ALFRDPALLR PGAPADDAVE AAWLLGPEAL | 420 |
| DWLGRARPGP PPGSVSFPAA GVHVLRRGAL EAFVSCGPHG QRGVGGHDHN DKLSFELRAA | 480 |
| GALAVCDPGM PVYGRAPEVR DAFRSTRAHA TVTVDGLEQS PIPPGRLFAL PDAAGARLLA | 540 |
| FAPGGEAERL AGEHRGFVAR AGVVHRRELA LAGAGLVVVD RLAGRGTHAV ELRWPLAHPA | 600 |
| PRLREASAAE AAALARLARL ARLRRPADPS RVVEVPLGPA GHLLVAFSAP AGLAPELAPS | 660 |
| LRSPGYGELV PASVATLAGP LACPAALATL FLHVAAEGSH PR | 702 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.