CAZyme3D

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Entry ID

Information for CAZyme ID: ABA62323.1

Basic Information

GenBank IDABA62323.1
FamilyCBM20, GH15
Sequence Length612
UniProt IDP36914(100,100)Download
Average pLDDT?94.03
CAZy50 ID6692
CAZy50 RepNo, EAA64118.1
Structure Cluster-
EC Number(s)3.2.1.3
Substrates(s)starch

Taxonomy

Tax ID5062
KingdomEukaryota
PhylumAscomycota
ClassEurotiomycetes
OrderEurotiales
FamilyAspergillaceae
GenusAspergillus
SpeciesAspergillus oryzae

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MVSFSSCLRA  LALGSSVLAV  QPVLRQATGL  DTWLSTEANF  SRQAILNNIG  ADGQSAQGAS60
PGVVIASPSK  SDPDYFYTWT  RDSGLVMKTL  VDLFRGGDAD  LLPIIEEFIS  SQARIQGISN120
PSGALSSGGL  GEPKFNVDET  AFTGAWGRPQ  RDGPALRATA  MISFGEWLVE  NGHTSIATDL180
VWPVVRNDLS  YVAQYWSQSG  FDLWEEVQGT  SFFTVAVSHR  ALVEGSSFAK  TVGSSCPYCD240
SQAPQVRCYL  QSFWTGSYIQ  ANFGGGRSGK  DINTVLGSIH  TFDPQATCDD  ATFQPCSARA300
LANHKVVTDS  FRSIYAINSG  RAENQAVAVG  RYPEDSYYNG  NPWFLTTLAA  AEQLYDALYQ360
WDKIGSLAIT  DVSLPFFKAL  YSSAATGTYA  SSTTVYKDIV  SAVKAYADGY  VQIVQTYAAS420
TGSMAEQYTK  TDGSQTSARD  LTWSYAALLT  ANNRRNAVVP  APWGETAATS  IPSACSTTSA480
SGTYSSVVIT  SWPTISGYPG  APDSPCQVPT  TVSVTFAVKA  TTVYGESIKI  VGSISQLGSW540
NPSSATALNA  DSYTTDNPLW  TGTINLPAGQ  SFEYKFIRVQ  NGAVTWESDP  NRKYTVPSTC600
GVKSAVQSDV  WR612

Predicted 3D structure by AlphaFold2 with pLDDT = 94.03 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH15(44-451)+CBM20(512-600)

MVSFSSCLRA  LALGSSVLAV  QPVLRQATGL  DTWLSTEANF  SRQAILNNIG  ADGQSAQGAS60
PGVVIASPSK  SDPDYFYTWT  RDSGLVMKTL  VDLFRGGDAD  LLPIIEEFIS  SQARIQGISN120
PSGALSSGGL  GEPKFNVDET  AFTGAWGRPQ  RDGPALRATA  MISFGEWLVE  NGHTSIATDL180
VWPVVRNDLS  YVAQYWSQSG  FDLWEEVQGT  SFFTVAVSHR  ALVEGSSFAK  TVGSSCPYCD240
SQAPQVRCYL  QSFWTGSYIQ  ANFGGGRSGK  DINTVLGSIH  TFDPQATCDD  ATFQPCSARA300
LANHKVVTDS  FRSIYAINSG  RAENQAVAVG  RYPEDSYYNG  NPWFLTTLAA  AEQLYDALYQ360
WDKIGSLAIT  DVSLPFFKAL  YSSAATGTYA  SSTTVYKDIV  SAVKAYADGY  VQIVQTYAAS420
TGSMAEQYTK  TDGSQTSARD  LTWSYAALLT  ANNRRNAVVP  APWGETAATS  IPSACSTTSA480
SGTYSSVVIT  SWPTISGYPG  APDSPCQVPT  TVSVTFAVKA  TTVYGESIKI  VGSISQLGSW540
NPSSATALNA  DSYTTDNPLW  TGTINLPAGQ  SFEYKFIRVQ  NGAVTWESDP  NRKYTVPSTC600
GVKSAVQSDV  WR612

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help